LOCUS BC013867 1655 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens palladin, cytoskeletal associated protein, mRNA (cDNA
clone IMAGE:3845400), partial cds.
ACCESSION BC013867
VERSION BC013867.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1655)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1655)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC013867.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: m Column: 24.
FEATURES Location/Qualifiers
source 1..1655
/db_xref="H-InvDB:HIT000036378"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3845400"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1655
/gene="PALLD"
/gene_synonym="CGI-151"
/gene_synonym="KIAA0992"
/gene_synonym="SIH002"
/db_xref="GeneID:23022"
/db_xref="HGNC:HGNC:17068"
/db_xref="IMGT/GENE-DB:17068"
/db_xref="MIM:608092"
CDS <1..1535
/gene="PALLD"
/gene_synonym="CGI-151"
/gene_synonym="KIAA0992"
/gene_synonym="SIH002"
/codon_start=3
/product="PALLD protein"
/protein_id="AAH13867.2"
/db_xref="GeneID:23022"
/db_xref="HGNC:HGNC:17068"
/db_xref="IMGT/GENE-DB:17068"
/db_xref="MIM:608092"
/translation="KGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKED
LLNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYR
LERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIY
WFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLM
VQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEG
KLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYT
CIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQI
FWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARL
DVYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESE
DL"
BASE COUNT 512 a 395 c 401 g 347 t
ORIGIN
1 ccaagggtgt cacccccgca ggatttccaa agaaggccag tagaactgct agaatagcct
61 ccgatgagga aattcaaggc acaaaggatg ctgttattca agacctggaa cgaaaacttc
121 gcttcaagga ggacctcctg aacaatggcc agccgaggtt aacatacgaa gaaagaatgg
181 ctcgtcgact gctaggtgct gacagtgcaa ctgtctttaa tattcaggag ccagaagagg
241 aaacagctaa tcaggaatac aaagtctcca gctgtgaaca gagactcatc agtgaaatag
301 agtacaggct agaaaggtct cctgtggatg aatcaggtga tgaagttcag tatggagatg
361 tgcctgtgga aaatggaatg gcaccattct ttgagatgaa gctgaaacat tacaagatct
421 ttgagggaat gccagtaact ttcacatgta gagtggctgg aaatccaaag ccaaagatct
481 attggtttaa agatgggaag cagatctctc caaagagtga tcactacacc attcaaagag
541 atctcgatgg gacctgctcc ctccatacca cagcctccac cctagatgat gatgggaatt
601 atacaattat ggctgcaaac cctcagggcc gcatcagttg tactggacgg ctaatggtac
661 aggctgtcaa ccaaagaggt cgaagtcccc ggtctccctc aggccatcct catgtcagaa
721 ggcctcgttc tagatcaagg gacagtggag acgaaaatga accaattcag gagcgattct
781 tcagacctca cttcttgcag gctcctggag atctgactgt tcaagaagga aaactctgca
841 gaatggactg caaagtcagt gggttaccaa ccccagatct aagctggcaa ctagatggaa
901 agcccgtacg ccctgacagt gctcacaaga tgctggtgcg tgagaacggg gtgcactctc
961 tgatcataga gccagtcacg tcacgtgatg ccggcatcta cacatgtata gctaccaacc
1021 gagcaggaca gaactcattc agcctggagc ttgtggttgc tgctaaagaa gcacacaaac
1081 cccctgtgtt tattgagaag ctccaaaaca caggagttgc tgatgggtac ccagtgcggc
1141 tggaatgtcg tgtattggga gtgccaccac ctcagatatt ttggaagaaa gaaaatgaat
1201 cactcactca cagcactgac cgagtgagca tgcaccagga caaccacggc tacatctgcc
1261 tgctcattca gggagccaca aaagaagatg ctgggtggta tactgtgtca gccaagaatg
1321 aagcagggat tgtgtcctgt actgccaggc tggacgttta cacccagtgg catcagcagt
1381 cacagagcac caagccaaaa aaagtacggc cctcagccag tcgctatgca gcactttcgg
1441 accagggact agacatcaaa gcagcgttcc aacctgaggc caacccatct cacctgacac
1501 tgaatactgc cttggtagaa agtgaggacc tgtaatccag cattcttgtt aaagctgaaa
1561 cactgaaaca gccattgcct tgaccaacat attcctttgt cacattatgt aaaaggcaga
1621 aacatacctt tgactagaaa aaaaaaaaaa aaaaa
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