LOCUS BC013690 2378 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:17226
IMAGE:4179089), complete cds.
ACCESSION BC013690
VERSION BC013690.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377588.
FEATURES Location/Qualifiers
source 1..2378
/db_xref="H-InvDB:HIT000036327"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17226 IMAGE:4179089"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2378
/gene="SYT11"
/gene_synonym="KIAA0080"
/gene_synonym="MGC10881"
/gene_synonym="MGC17226"
/gene_synonym="SYT12"
/db_xref="GeneID:23208"
/db_xref="HGNC:HGNC:19239"
/db_xref="MIM:608741"
CDS 231..1526
/gene="SYT11"
/gene_synonym="KIAA0080"
/gene_synonym="MGC10881"
/gene_synonym="MGC17226"
/gene_synonym="SYT12"
/codon_start=1
/product="synaptotagmin XI"
/protein_id="AAH13690.1"
/db_xref="GeneID:23208"
/db_xref="HGNC:HGNC:19239"
/db_xref="MIM:608741"
/translation="MAEITNIRPSFDVSPVVAGLIGASVLVVCVSVTVFVWSCCHQQA
EKKHKNPPYKFIHMLKGISIYPETLSNKKKIIKVRRDKDGPGREGGRRNLLVDAAEAG
LLSRDKDPRGPSSGSCIDQLPIKMDYGEELRSPITSLTPGESKTTSPSSPEEDVMLGS
LTFSVDYNFPKKALVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKRHRVKTRVLRKT
LDPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQ
LTRDIIKRNIQKCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGNPYVKV
NVYYGRKRIAKKKTHVKKCTLNPIFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNEV
VGRLILGAHSVTASGAEHWREVCESPRKPVAKWHSLSEY"
BASE COUNT 626 a 609 c 576 g 567 t
ORIGIN
1 caggaccagt ctgactgcac ctgcatcctt agctcagagc atccccggag catcttaaga
61 gctgagcgca gctgacaact aggggccgga ccgtcgcagg aggcgtccgc tggatacctt
121 cccccttccc tgacctagag ctctacagct gctgcctcgg tactgaccga gggttcccag
181 agctgtctta ccattgcaaa aacgttatag caacagcctc tgattacgac atggctgaga
241 tcaccaatat ccgacctagc tttgatgtgt caccggtggt ggccggcctc atcggggcct
301 ctgtgctggt ggtgtgtgtc tcggtgaccg tctttgtctg gtcatgctgc caccagcagg
361 cagagaagaa gcacaagaac ccaccataca agtttattca catgctcaaa ggcatcagca
421 tatacccaga gaccctcagc aacaagaaga aaatcatcaa agtgcggaga gacaaagatg
481 gtcctgggag ggaaggtgga cgtaggaacc tgttggtgga cgcagcagag gctggcctgc
541 taagccgaga caaagatccc agggggccta gctctggatc ttgtatagac caattaccca
601 tcaaaatgga ctatggggaa gaactaagga gccctattac aagcctgacc cctggggaga
661 gcaaaaccac ctctccatca tctccagagg aggatgtcat gctaggatcc ctcaccttct
721 cagtggacta taacttcccg aaaaaagccc tggtggtgac aatccaggag gcccacgggc
781 tgccagtgat ggatgaccag acccagggat ctgaccccta catcaaaatg accatccttc
841 ctgacaaacg gcatcgggtg aagaccagag tgctgcggaa gaccctggac cctgtgtttg
901 acgagacctt caccttctat ggcatcccct acagccagct gcaggacctg gtgctgcact
961 tccttgtcct cagctttgac cgcttctctc gggatgatgt cattggcgag gtcatggtgc
1021 cactggcagg ggtggacccc agcacaggca aggtacaact gaccagggac atcatcaaaa
1081 ggaatatcca gaagtgcatc agcagagggg agctccaggt gtctctgtca tatcagcctg
1141 tggcacagag aatgacagtg gtggtcctca aagccagaca cttgccgaag atggatatca
1201 ccggtctctc aggtaatcct tatgtcaagg tgaacgtcta ctacggcaga aagcgcattg
1261 ccaagaagaa aacccatgtg aagaagtgca ctttgaaccc catcttcaat gaatctttca
1321 tctacgacat ccccactgac ctcctgcctg atatcagcat cgagttcctc gttatcgact
1381 tcgatcgcac caccaagaat gaggtggtgg ggaggctgat cctgggggca cacagtgtca
1441 cagccagtgg tgctgaacac tggagagagg tctgcgagag cccccgcaag cctgtggcca
1501 agtggcacag tctgagcgag tactaatcct gttcttctct cctctaatcc ccgggggcca
1561 agctggggag ggatgtggag gggaaaaaga tgacagagaa gtggactcca aacctcattt
1621 tagttgtaga agaaaatttc ttacaaaaca aattccacaa agaacaccct atatgaccac
1681 agctgcagat cagttcttag caatgatgtt tttttttctg ctttgcaagg cgctagaatc
1741 ttttatttta ctttattttt tttgaggtgg agtttcgctc ttgttgcccg ggctggagtg
1801 caatggtgag atctcaactc actgcaacct ctgccctcca ggttcaagtg attctcctcc
1861 ctcagcctcc caagtagctg ggattacagg cacccacgag catgcccggc taattttttg
1921 tattttcagt agagatgggt ttcaccatgt tggccaggct ggtctcgaat tccagacctc
1981 aggtgatcca cccgcctcgg cctcccaaag tgctgggatt acaggtgcga gccaccgtgc
2041 ccggcctctg gttttgtttt gttttttttt tttaatgggg gacaaaagag agggaaagac
2101 ccctataaat ctatatataa caatgtaacc atatacttgc atgtctaata caaactgaag
2161 aaattagcct aactgccaat atcaagttgc agattttaat ccatggaaat tgtgttttgt
2221 gctgaattgt atttgctgat tacctgaaat tggcttcttt ttattgggct tctctggaga
2281 atttctccca ctccccacct ctgcagaaga aaattttgct cttataaaac ctcatgtttt
2341 catcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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