LOCUS BC013006 1638 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens HLA-B associated transcript 1, mRNA (cDNA clone
MGC:3991 IMAGE:3010263), complete cds.
ACCESSION BC013006
VERSION BC013006.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013006.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45580711.
FEATURES Location/Qualifiers
source 1..1638
/db_xref="H-InvDB:HIT000036076_08"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3991 IMAGE:3010263"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1638
/gene="BAT1"
/gene_synonym="D6S81E"
/db_xref="GeneID:7919"
/db_xref="HGNC:HGNC:13917"
/db_xref="MIM:142560"
CDS 133..1419
/gene="BAT1"
/gene_synonym="D6S81E"
/codon_start=1
/product="HLA-B associated transcript 1"
/protein_id="AAH13006.1"
/db_xref="GeneID:7919"
/db_xref="HGNC:HGNC:13917"
/db_xref="MIM:142560"
/translation="MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHS
SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLA
TLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV
LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMT
PHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR
KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFK
DFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS
DENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR"
BASE COUNT 401 a 404 c 415 g 418 t
ORIGIN
1 ctcttctgtt agaaatagta tctttgtttt cctttgctgt tcctcaatcc cctactcttc
61 accccttgtt ttcacctatt ttgcgagaac ccatccagat cccccttccc ttcttcccct
121 gccggcccag ttatggcaga gaacgatgtg gacaatgagc tcttggacta tgaagatgat
181 gaggtggaga cagcagctgg gggagatggg gctgaggccc ctgccaagaa ggatgtcaag
241 ggctcctatg tctccatcca cagctctggc tttcgtgact tcctgctcaa gccagagttg
301 ctccgggcca ttgtcgactg tggctttgag catccgtcag aagtccagca tgagtgcatc
361 cctcaggcca ttctgggaat ggatgtcctg tgccaggcca agtcgggcat gggaaagaca
421 gcagtgtttg tcttggccac actgcaacag ctggagccag ttactgggca ggtgtctgtg
481 ctggtgatgt gtcacactcg ggagttggct tttcagatca gcaaggaata tgagcgcttc
541 tctaaataca tgcccaatgt caaggttgct gttttttttg gtggtctgtc tatcaagaag
601 gatgaagagg tgctgaagaa gaactgcccg catatcgtcg tggggactcc aggccgtatc
661 ctagccctgg ctcgaaataa gagcctcaac ctcaaacaca ttaaacactt tattttggat
721 gaatgtgata agatgcttga acagctcgac atgcgtcggg atgtccagga aatttttcgc
781 atgacccccc acgagaagca ggtcatgatg ttcagtgcta ccttgagcaa agagatccgt
841 ccagtctgcc gcaagttcat gcaagatcca atggagatct tcgtggatga tgagacgaag
901 ttgacgctgc atgggttgca gcagtactac gtgaaactga aggacaacga gaagaaccgg
961 aagctctttg accttctgga tgtccttgag ttcaaccagg tggtgatctt tgtgaagtct
1021 gtgcagcggt gcattgcctt ggcccagcta ctagtggagc agaacttccc agccattgcc
1081 atccaccgtg ggatgcccca ggaggagagg ctttctcggt atcagcagtt taaagatttt
1141 caacgacgaa ttcttgtggc taccaaccta tttggccgag gcatggacat cgagcgggtg
1201 aacattgctt ttaattatga catgcctgag gattctgaca cctacctgca tcgggtggcc
1261 agagcaggcc ggtttggcac caagggcttg gctatcacat ttgtgtccga tgagaatgat
1321 gccaagatcc tcaatgatgt gcaggatcgc tttgaggtca atattagtga gctgcctgat
1381 gagatagaca tctcctccta cattgaacag acacggtaga agactcgccc attttggaat
1441 gtgaccgtct gtccttcagg agaggacacc agggtggggg tgaaggagac actactgccc
1501 ccacccctga cagcccccac cccatggctt ccatcttttg catcaccacc actcctgaac
1561 ccccatttct gatttgtcag aatttttttt taacaaaact aaaaatgaaa cacatgtgtc
1621 aaaaaaaaaa aaaaaaaa
//