LOCUS BC012733 1314 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens chromatin modifying protein 1B, mRNA (cDNA clone
MGC:15076 IMAGE:3928338), complete cds.
ACCESSION BC012733
VERSION BC012733.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1314)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1314)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC012733.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734391.
FEATURES Location/Qualifiers
source 1..1314
/db_xref="H-InvDB:HIT000035921"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15076 IMAGE:3928338"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1314
/gene="CHMP1B"
/gene_synonym="C10orf2"
/gene_synonym="C18-ORF2"
/gene_synonym="C18orf2"
/gene_synonym="CHMP1.5"
/gene_synonym="Vps46-2"
/db_xref="GeneID:57132"
/db_xref="HGNC:HGNC:24287"
/db_xref="MIM:606486"
CDS 55..654
/gene="CHMP1B"
/gene_synonym="C10orf2"
/gene_synonym="C18-ORF2"
/gene_synonym="C18orf2"
/gene_synonym="CHMP1.5"
/gene_synonym="Vps46-2"
/codon_start=1
/product="chromatin modifying protein 1B"
/protein_id="AAH12733.3"
/db_xref="GeneID:57132"
/db_xref="HGNC:HGNC:24287"
/db_xref="MIM:606486"
/translation="MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGN
MEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDAT
LKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEA
GLDLNMELPQGQTGSVGTSVASAEQDELSQRLARLRDQV"
BASE COUNT 406 a 260 c 322 g 326 t
ORIGIN
1 ctgccttcgg cgcgcttctc agcagggccg ccgacccaaa ggagccgtct gactatgtct
61 aacatggaga aacacctgtt caacctgaag ttcgcggcca aagaactgag taggagtgcc
121 aaaaaatgcg ataaggagga aaaggccgaa aaggccaaaa ttaaaaaggc cattcagaag
181 ggcaacatgg aagttgcgag gatacacgcc gaaaatgcca tccgccagaa gaaccaggcg
241 gtgaatttct tgagaatgag tgcgcgagtc gatgcagtgg ctgccagggt ccagacggcg
301 gtgacgatgg gcaaggtgac caagtcgatg gctggtgtgg ttaagtcgat ggatgcgaca
361 ttgaagacca tgaatctgga gaagatttct gctttgatgg acaaattcga gcaccagttt
421 gagactctgg acgtccagac gcagcaaatg gaagacacga tgagcagcac gacgacgctc
481 accactcccc agaaccaagt ggatatgctg ctccaggaaa tggcagatga ggcgggcctc
541 gacctcaaca tggagctgcc gcagggccag accggctccg tgggcacgag cgtggcttcg
601 gcggagcagg atgaactgtc tcagagactg gcccgccttc gggatcaagt gtgacggcag
661 aacccgctct gaggtttcct ggccatagcc accctttgaa atgctctctg tgtgttagag
721 agatactata ccctagaaac tctgaacacg ccagaatgct gaaatgccct tctacctttg
781 ggtttacagc cccctccaca taaattaaga aattcagtat ttctgcactc ttagctggat
841 tctaaagttc tgtatagctc gtaatgatgg tatttttata gcagcctttt aacagaacta
901 gttaatttcg tgtatatgaa tctttctcga agatctggtc aaaactgtat tcagtttcct
961 gcccagaatg atcagattga aggtggttgg tttttattat tatttagtgt gattgatagt
1021 atctagaatg gcaggtggtg cataaaagtt aaagagaggg gaaagattac ttagtttggt
1081 tatacagtta taaacaccat gcagtgtatt cggtggactg tgctatttct gtttatcctt
1141 tgggttttgg tttttgtttt ttttttttgc cttcacagtg agactgcaaa tgattgttct
1201 cataacgtat attattaata aatgtggtcc tataatttat actgaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//