LOCUS BC012415 1341 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tryptophan rich basic protein, mRNA (cDNA clone
MGC:9135 IMAGE:3865141), complete cds.
ACCESSION BC012415
VERSION BC012415.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1341)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1341)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536427.
FEATURES Location/Qualifiers
source 1..1341
/db_xref="H-InvDB:HIT000035805"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9135 IMAGE:3865141"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1341
/gene="WRB"
/gene_synonym="CHD5"
/db_xref="GeneID:7485"
/db_xref="HGNC:HGNC:12790"
/db_xref="MIM:602915"
CDS 32..556
/gene="WRB"
/gene_synonym="CHD5"
/codon_start=1
/product="tryptophan rich basic protein"
/protein_id="AAH12415.1"
/db_xref="GeneID:7485"
/db_xref="HGNC:HGNC:12790"
/db_xref="MIM:602915"
/translation="MSSAAADHWAWLLVLSFVFGCNVLRILLPSFSSFMSRVLQKDAE
QESQMRAEIQDMKQELSTVNMMDEFARYARLERKINKMTDKLKTHVKARTAQLAKIKW
VISVAFYVLQAALMISLIWKYYSVPVAVVPSKWITPLDRLVAFPTRVAGGVGITCWIL
VCNKVVAIVLHPFS"
BASE COUNT 382 a 253 c 281 g 425 t
ORIGIN
1 agcggaccca gcacagccag gagcgtccgg gatgagctca gccgcggccg accactgggc
61 gtggttgctg gtgctcagct tcgtgtttgg atgcaatgtt cttaggatcc tcctcccgtc
121 cttctcatcc ttcatgtcca gggtgctgca gaaggacgcg gagcaggagt cacagatgag
181 agcggagatc caggacatga agcaggagct ctccacagtc aacatgatgg acgagtttgc
241 cagatatgcc aggctggaaa gaaagatcaa caagatgacg gataagctca aaacccatgt
301 gaaagctcgg acagctcaat tagccaagat aaaatgggtg ataagtgtcg ctttctacgt
361 attgcaggct gccctgatga tctcactcat ttggaagtat tattctgtcc ctgtggctgt
421 cgtgccgagt aaatggataa cccccctaga ccgcctggta gcctttccta ctagagtagc
481 aggtggtgtt ggaattacct gttggatttt agtctgtaac aaagttgtcg ctattgtgct
541 tcatccgttc agctgaacag gaggatggat acagccgcga ggctaaaaaa cggatttcct
601 cttcctagct taaaatctga tttacactgt tttgtttttt aagaaacaaa agtgcatagt
661 ttagattttt tttttgttga atatgtttgt tcttggactt tatgagatag tcttataaga
721 atcacgattt tctacacctg tcattgagcc aagaaagtcc agtttatgac acgtatgtac
781 tagtgaacac cgtcctcgat ctgtacgaaa tgtgaaatgt ttagggacat ctccatgctg
841 tcacttgtga tttgccctct tatgtatttt ggtcatattg ccaactggaa agtcaaaatt
901 ttctaacaac tttaagtaag ttctttgaag acttagtgct gtttttaatc cagtttagaa
961 agtaacttaa ttttaatacc gctactaaaa attcgaaaat ttcttcttta atcacattca
1021 atatggttaa aagaacaaca ctaattgaca ttgcgtgggc tttttctccc tttgtttaaa
1081 atgtcatttg ttgagcaaga gttgtatagt attatctact tacttgaggc tgttaatttt
1141 tcattacagt gttttgtaaa tgtatccacg agaccatgat gcattgtttt gtgctcaact
1201 tgtgttttgt atttaaagca ttttgaatga agtgtatttt ataagcattt aatatttatg
1261 ctctttagaa tggaacacag aaaacaaacc ttataagtcc tgattaaatt aatctgaacc
1321 aataaaaaaa aaaaaaaaaa a
//