LOCUS BC011960 1500 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 10, mRNA (cDNA clone MGC:9114 IMAGE:3881328), complete
cds.
ACCESSION BC011960
VERSION BC011960.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28605136.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000035567"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9114 IMAGE:3881328"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1500
/gene="PSMD10"
/gene_synonym="dJ889N15.2"
/gene_synonym="p28"
/db_xref="GeneID:5716"
/db_xref="HGNC:HGNC:9555"
/db_xref="MIM:603480"
CDS 34..714
/gene="PSMD10"
/gene_synonym="dJ889N15.2"
/gene_synonym="p28"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 10"
/protein_id="AAH11960.1"
/db_xref="GeneID:5716"
/db_xref="HGNC:HGNC:9555"
/db_xref="MIM:603480"
/translation="MEGCVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTAL
HWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAV
NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLY
YKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGL
ILKRMVEG"
BASE COUNT 446 a 273 c 328 g 453 t
ORIGIN
1 gctcgcgcga caagtagttg ctgggacagc gaaatggagg ggtgtgtgtc taacctaatg
61 gtctgcaacc tggcctacag cgggaagctg gaagagttga aggagagtat tctggccgat
121 aaatccctgg ctactagaac tgaccaggac agcagaactg cattgcactg ggcatgctca
181 gctggacata cagaaattgt tgaatttttg ttgcaacttg gagtgccagt gaatgataaa
241 gacgatgcag gttggtctcc tcttcatatt gcggcttctg ctggccggga tgagattgta
301 aaagcccttc tgggaaaagg tgctcaagtg aatgctgtca atcaaaatgg ctgtactccc
361 ttacattatg cagcttcgaa aaacaggcat gagatcgctg tcatgttact ggaaggcggg
421 gctaatccag atgctaagga ccattatgag gctacagcaa tgcaccgggc agcagccaag
481 ggtaacttga agatgattca tatccttctg tactacaaag catccacaaa catccaagac
541 actgagggta acactcctct acacttagcc tgtgatgagg agagagtgga agaagcaaaa
601 ctgctggtgt cccaaggagc aagtatttac attgagaata aagaagaaaa gacacccctg
661 caagtggcca aaggtggcct gggtttaata ctcaagagaa tggtggaagg ttaaacagct
721 tggatttatt cttactttgt atgttgtgtt gttgtcccca gtgtcctaca aactaatgta
781 tttgtgcaca agacatcatc tatgaatgat gaagttttct caccttcaaa gtcttataaa
841 catgttgact cttgttcctg ctgagttact tgttcgaagc ttacagcttg ttttccaggc
901 atcgaataac tgttgagatt gttctactgt tgtcgtatat tcttctatat tgaattctgg
961 ttaatttgga gtaactaatt ctgtggctgt tgtgagtctt cagcaccctc ccatgtacct
1021 tatatccctc tctgaaacag aacagctcca atagcaacaa gctagttgtt ctgccagatg
1081 tttctatgtg gattctgtaa tgttcctcca tacagttaaa acatcctaac ttgtttttca
1141 agctcactca ggcctacgcc aaacgtttct gtttttttta accatgaggt ttaatttatt
1201 tttgtgatag gagggatatt tacatatttt agtggaccac attttaagtt ggatggtgtg
1261 ctctaaaata ctgaaaaaca atagcccata tacctatgta tttgtttttg atgggttgtt
1321 tactctgaaa taaaatgtat ggttttctta aaaggaagtt ttaaagtacc tattttgtgt
1381 catcctgtat tgaaaagaat gtcaagcttg ttaaaatgac atgtaacaaa aatgtatttt
1441 gatttgtatt tcagaaacta aaaaataaaa tgttgaaaga aaaaaaaaaa aaaaaaaaaa
//