LOCUS BC011889 1894 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein kinase C and casein kinase substrate in
neurons 3, mRNA (cDNA clone MGC:19935 IMAGE:3833027), complete cds.
ACCESSION BC011889
VERSION BC011889.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1894)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1894)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011889.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147484.
FEATURES Location/Qualifiers
source 1..1894
/db_xref="H-InvDB:HIT000035518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19935 IMAGE:3833027"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1894
/gene="PACSIN3"
/gene_synonym="SDPIII"
/db_xref="GeneID:29763"
/db_xref="HGNC:HGNC:8572"
/db_xref="MIM:606513"
CDS 163..1437
/gene="PACSIN3"
/gene_synonym="SDPIII"
/codon_start=1
/product="protein kinase C and casein kinase substrate in
neurons 3"
/protein_id="AAH11889.1"
/db_xref="GeneID:29763"
/db_xref="HGNC:HGNC:8572"
/db_xref="MIM:606513"
/translation="MAPEEDAGGEALGGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQ
ERARIEKAYAQQLADWARKWRGTVEKGPQYGTLEKAWHAFFTAAERLSALHLEVREKL
QGQDSERVRAWQRGAFHRPVLGGFRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHAA
RKDEKTAQTRESHAKADSAVSQEQLRKLQERVERCAKEAEKTKAQYEQTLAELHRYTP
RYMEDMEQAFETCQAAERQRLLFFKDMLLTLHQHLDLSSSEKFHELHRDLHQGIEAAS
DEEDLRWWRSTHGPGMAMNWPQFEEWSLDTQRTISRKEKGGRSPDEVTLTSIVPTRDG
TAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEADELSFRAGEELLK
MSEEDEQGWCQGQLQSGRIGLYPANYVECVGA"
BASE COUNT 440 a 511 c 650 g 293 t
ORIGIN
1 aggactcggg ccggagcgtg gccggacccc cacccgccga ggggcccagg gaggacgcgg
61 cagagtcacg gtggcagcat tgagagttgg acacccgggt ccttgaagtg atctctaggc
121 cccagcccca aatccgccac cattccgtgc tgcggggaca ccatggctcc agaagaggac
181 gctggagggg aggccttagg gggcagtttc tgggaggctg gcaactacag gcgcacggta
241 cagcgggtgg aggacgggca ccggctgtgc ggggacctgg tcagctgctt ccaggagcgc
301 gcccgcatcg agaaggctta tgcccagcag ttggctgact gggcccgaaa gtggaggggg
361 accgtggaga agggccccca gtatggcaca ctggagaagg cctggcatgc ctttttcacg
421 gcggctgagc ggctgagcgc gctgcacctg gaggtgcggg agaagctgca agggcaggac
481 agtgagcggg tgcgcgcctg gcagcggggg gctttccacc ggcctgtgct gggcggcttc
541 cgcgagagcc gggcggccga ggacggcttc cgcaaggccc agaagccctg gctgaagagg
601 ctgaaggagg ttgaggcttc caagaaaagc taccacgcag cccggaagga tgagaagacc
661 gcccagacga gggagagcca cgcaaaggca gacagcgccg tctcccagga gcagctgcgc
721 aaactgcagg aacgggtgga acgctgtgcc aaggaggccg agaagacaaa agctcagtat
781 gagcagacgc tggcagagct gcatcgctac actccacgct acatggagga catggaacag
841 gcctttgaga cctgccaggc cgccgagcgc cagcggcttc ttttcttcaa ggatatgctg
901 ctcaccttac accagcacct ggacctttcc agcagtgaga agttccatga actccaccgt
961 gacttgcacc agggcattga ggcagccagt gacgaagagg atctgcgctg gtggcgcagc
1021 acccacgggc caggcatggc catgaactgg ccacagttcg aggagtggtc cttggacaca
1081 cagaggacaa tcagccggaa agagaagggt ggccggagcc ctgatgaggt taccctgacc
1141 agcattgtgc ctacaagaga tggcaccgca cccccacccc agtccccggg gtccccaggc
1201 acggggcagg atgaggagtg gtcagatgaa gagagtcccc ggaaggctgc caccggggtt
1261 cgggtgaggg cactctatga ctacgctggc caggaagctg atgagctgag cttccgagca
1321 ggggaggagc tgctgaagat gagtgaggag gacgagcagg gctggtgcca aggccagttg
1381 cagagtggcc gcattggcct gtaccctgcc aactacgtgg agtgtgtggg cgcctgagtg
1441 tcctgacagc ccttctgcaa cgtttaccca ccctggttca gagcccagct tctcctggag
1501 agccggaccc tcagggccct gaaccgtcgc tctctggctg ctcctctgtc ccttgaggga
1561 ggaagtcctg ggacccaggg aggggagggg cctttgtcta gggaagggac tggtagggaa
1621 gggacgagtc taggctgagg gcaagatggg aggtcagagg tgacagaagc gttcaggggt
1681 gcctgggcct ccccaggagc tgtggactca gttcctgacc tctgctttgg ggttcctggg
1741 gtgggcttgg ggtgagtgta gttctggcct agcagcaccc tcttgtggct tgttctagcg
1801 tgtattaaaa cttgacacac acccacacac aaaaccaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//