LOCUS BC011859 2058 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens AHNAK nucleoprotein 2, mRNA (cDNA clone
IMAGE:4309957), partial cds.
ACCESSION BC011859
VERSION BC011859.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2058)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2058)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011859.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Linehan
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2058
/db_xref="H-InvDB:HIT000087725"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4309957"
/tissue_type="Kidney, renal carcinoma (ascites)"
/clone_lib="NIH_MGC_45"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2058
/gene="AHNAK2"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
CDS <1..1210
/gene="AHNAK2"
/codon_start=2
/product="AHNAK2 protein"
/protein_id="AAH11859.2"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
/translation="FSFAAPSSEDDVFIPTVREVQCPEANIDTALCKESPGLWGASIL
KAGAGVPGEQPVDLNLPLEAPPISKVRVHIQGAQVESQEVTIHSIVTPEFVDLSVPRT
FSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHTQARVYTTMTQHSRTQEGTEEAPI
QATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQTLTFEVPSGHQLADSCSDEEPAEI
LEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLWFWLPNIGFSSSVDETGVDSKNDV
QRSAPIQTQPEARPEAELPKKQEKAGWFRFPKLGFSSSPTKKSKSTEDGAELEEQKLQ
EETITFFDARESFSPEEKEEGELIGPVGTGLDSRVMVTSAARTELILPEQDRKADDES
KGSGLGPNEG"
BASE COUNT 606 a 509 c 492 g 451 t
ORIGIN
1 gttctccttc gctgccccca gctcagagga tgatgtgttc atccccactg tgagggaagt
61 gcagtgtcca gaggccaata ttgatacagc cctttgtaag gaaagtccgg ggctctgggg
121 agccagcatc ctgaaggcag gtgctggggt ccctggggag cagcctgtgg accttaacct
181 gcctttggaa gctcccccaa tttcaaaggt cagagtgcat attcagggtg ctcaggttga
241 aagtcaagag gtcactatac acagcatagt gacaccagag tttgtagatc tctcagtacc
301 caggactttt tccactcaga ttgtgcggga atcagagatc cccacgtcag agattcaaac
361 accttcgtac ggattttcct tattaaaagt gaaaatccca gagccccaca cgcaggctag
421 agtgtacaca acaatgactc aacactctag gactcaggag ggcacagaag aggctcccat
481 acaagccacc ccaggagtag actccatttc tggagatctc cagcctgaca ctggagaacc
541 atttgagatg atctcttcca gcgtcaatgt actgggacag caaacactca catttgaagt
601 tccttctggc caccagcttg cagacagctg ttcagatgag gagccagcag aaattcttga
661 gtttccccct gatgatagcc aagaggcaac cacaccactg gcagatgaag gcagggctcc
721 aaaagacaaa ccagaaagta aaaaatctgg tctgctctgg ttttggcttc caaacattgg
781 gttttcctct tctgttgatg agacaggtgt tgattccaaa aatgacgtcc agagatctgc
841 tcccattcaa acacagcctg aggcacgacc agaggcagaa ctgcctaaaa aacaggagaa
901 ggcaggctgg ttccgatttc ccaaattagg gttctcctca tctcctacca agaaaagcaa
961 aagcaccgaa gatggggcag agctggaaga acaaaaactt caagaagaaa caatcacgtt
1021 ttttgatgcc cgagaaagtt tctcccctga agagaaggaa gagggtgaac tgatcgggcc
1081 tgtgggcact gggctggact ccagagtgat ggtgacatcc gcggcaagaa cagagttaat
1141 cctgcccgag caggacagaa aagctgacga tgaaagcaaa gggtcaggcc tgggaccaaa
1201 tgaaggctga gaggtatggc tcatcggtac aagagagatg caaaaaacta agttggaaag
1261 taaaggctac acacacatat ggagcacccc atcccacagc acattacatc cacctcactt
1321 cacagaacgg agaacagagc agaaatgacc agaacacctt tgtcaccatc acacagccct
1381 cctaaaatgg aaccaaagct tcccagctcc ctcaaagctt tggatgcaaa gaaggcaccc
1441 tgacttccac aagacaccag aattcacacg gtactcagag gcactgctgg ggaagtttgt
1501 tggtctttat tagataaatt tccagagacc tgtccataat acccaacaga acatgactgt
1561 ttctttgagg aaagggttat aatgtctgtg gtgtacaagt cgtttttggt ataacttctt
1621 tcctgctgct gctgcttccc ggcaaacata gttttcctat ttcaggcaga gtgcggtata
1681 ttccaggaaa cactgtttcc tactcactta gcttacttct ttgttgaatg cctcactaat
1741 ggcaagtttc aagatgtttt gggtgacaat gcacacatgc tgggcaaaag ggtgatggcc
1801 agtggctggc agctgggcca gcagaagcta ggacatctgt gagttgtcat tctcatctat
1861 ccatgtccac tggcctgcca gcatccgcca gtgccttgcc agtgtgcacg gtcccacact
1921 gtggcccctg agtcccctaa tgtacacgct gcagccagaa tgcagatgga gctggcttgg
1981 ctgttccctg gatgggcaat aaagaaagtg ctgcatccca aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaa
//