LOCUS BC011858 1985 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat and BTB (POZ) domain containing 1, mRNA
(cDNA clone MGC:20585 IMAGE:4309664), complete cds.
ACCESSION BC011858
VERSION BC011858.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1985)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1985)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011858.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777622.
FEATURES Location/Qualifiers
source 1..1985
/db_xref="H-InvDB:HIT000035497"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20585 IMAGE:4309664"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1985
/gene="ABTB1"
/gene_synonym="BPOZ"
/gene_synonym="EF1ABP"
/gene_synonym="MGC20585"
/gene_synonym="PP2259"
/db_xref="GeneID:80325"
/db_xref="HGNC:HGNC:18275"
/db_xref="MIM:608308"
CDS 87..1523
/gene="ABTB1"
/gene_synonym="BPOZ"
/gene_synonym="EF1ABP"
/gene_synonym="MGC20585"
/gene_synonym="PP2259"
/codon_start=1
/product="ankyrin repeat and BTB (POZ) domain containing
1"
/protein_id="AAH11858.1"
/db_xref="GeneID:80325"
/db_xref="HGNC:HGNC:18275"
/db_xref="MIM:608308"
/translation="MDTSDLFASCRKGDVGRVRYLLEQRDVEVNVRDKWDSTPLYYAC
LCGHEELVLYLLANGARCEANTFDGERCLYGALSDPIRRALRDYKQVTASCRRRDYYD
DFLQRLLEQGIHSDVVFVVHGKPFRVHRCVLGARSAYFANMLDTKWKGKSVVVLRHPL
INPVAFGALLQYLYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLEAKCEKVSEFVASK
PGTCVKVLTIEPPPADPRLREDMALLADCALPPELRGDLWELPFPCPDGFNSCPDICF
RVAGCSFLCHKAFFCGRSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVL
YYMYSDHTELSPEAAYDVLSVADMYLLPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFR
LARLEDQCTEYMAKVIEKLVEREDFVEAVKEEAAAVAARQETDSIPLVDDIRFHVAST
VQTYSAIEEAQQRLRALEDLLVSIGLDC"
BASE COUNT 361 a 594 c 635 g 395 t
ORIGIN
1 cggggcgggg ctgagcgtgt ttacatccgc cgggtgcgcg gcttcgccgc ccgaggtcgt
61 tcggctcggg taccatcctc cgcgccatgg acaccagcga cctgttcgcc agctgcagga
121 agggggatgt gggccgagtg cggtacctgc tggagcagcg agacgtggag gtgaatgtgc
181 gggacaagtg ggacagcacc cccttgtact atgcctgctt gtgtgggcac gaggagctgg
241 tactctacct tctggccaat ggagcccgct gcgaggccaa caccttcgat ggtgagcgct
301 gcctctatgg ggcactgagt gaccccatcc gccgggctct acgcgattac aagcaggtca
361 cggcttcctg caggaggcgg gattactatg acgacttctt gcagcggctt ctagagcagg
421 gcatccacag tgacgtggtc tttgtagtac acgggaagcc attccgggtg catcgctgcg
481 tcctgggtgc acgtagtgcc tactttgcca acatgctgga caccaaatgg aagggcaaga
541 gtgtcgtggt tctcaggcac ccactgatca accccgtggc ctttggggcc ctgctgcagt
601 acctgtacac aggccgcctg gacattggcg tagagcatgt gagtgactgt gagcgcctgg
661 ccaagcaatg ccagctgtgg gacctgctca gcgacctgga ggccaagtgc gagaaggtgt
721 ctgagtttgt ggcgtctaag ccaggcacgt gtgtgaaggt gctgaccatc gagcccccac
781 ctgcagaccc ccgcctccgg gaggacatgg cgctgctggc cgattgtgcc ctgccccccg
841 agctccgagg tgatctttgg gagctgccct tcccttgtcc tgacggcttc aacagctgcc
901 ctgacatctg cttccgagtg gctggctgca gcttcctctg ccacaaggcc tttttctgtg
961 gccgcagtga ctacttccga gccctgctgg atgaccactt ccgagagagc gaggagccag
1021 cgacctcagg gggcccccca gccgtcaccc tgcatggcat ctcacccgac gtcttcactc
1081 acgtgctcta ctacatgtac agcgaccaca ctgagctgtc ccccgaggca gcctatgatg
1141 tgctgagcgt cgccgacatg tacctgctgc caggcctgaa gaggctgtgc ggccgcagcc
1201 tggctcagat gctagacgag gacactgtgg tgggtgtgtg gcgcgtggcc aagctcttcc
1261 gcctggcgcg gcttgaggac cagtgcactg agtacatggc caaggtcatt gagaagctgg
1321 tggagcggga ggacttcgtg gaggcggtga aggaggaggc agcggctgtg gcagcccggc
1381 aggagacgga ctctatcccg ctggtggacg acatccgctt ccacgtggcc agcacggtgc
1441 agacctacag cgccatagag gaggcgcagc agcgtctgcg ggcactcgag gacctgctcg
1501 tgtccatcgg tctggactgt tgagcccctg gctgggcagc cccaggggcc aggagctctc
1561 ttggagacaa gcatgtgtat gcgtttgtgt gcagctcttc ttcctgctcc ctgcacattg
1621 agggcttcat ggggggtgcg aggggctcag tggggcttct cttccctcca tgagcctgga
1681 gaccccaggg gaggatccat ttgggatgag ccccctcccc ccaatgcaca agccagcccc
1741 caagaccctg ggggtggaca ccactcaggg aaacctgggg tgggggtggg ctttggtctt
1801 agcactttcc ttctccagat cccccctacc caccccagtc ccaaatccag tcctctggcc
1861 cttgcctagc cctgaattgc ttctctaagc tggtgttccc atgcacaggg ccattcagga
1921 agggctgggg gagtgtgtgt ggcaataaag cttgaaggca ccgtgaaaaa aaaaaaaaaa
1981 aaaaa
//