LOCUS BC011826 1781 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 2, mRNA (cDNA
clone MGC:19982 IMAGE:3832035), complete cds.
ACCESSION BC011826
VERSION BC011826.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1781)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011826.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: e Column: 15.
FEATURES Location/Qualifiers
source 1..1781
/db_xref="H-InvDB:HIT000035477"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19982 IMAGE:3832035"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1781
/gene="CNOT2"
/gene_synonym="CDC36"
/gene_synonym="HSPC131"
/gene_synonym="NOT2H"
/db_xref="GeneID:4848"
/db_xref="HGNC:HGNC:7878"
/db_xref="MIM:604909"
CDS 135..1757
/gene="CNOT2"
/gene_synonym="CDC36"
/gene_synonym="HSPC131"
/gene_synonym="NOT2H"
/codon_start=1
/product="CCR4-NOT transcription complex, subunit 2"
/protein_id="AAH11826.1"
/db_xref="GeneID:4848"
/db_xref="HGNC:HGNC:7878"
/db_xref="MIM:604909"
/translation="MVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYY
SQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQ
GTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSS
SGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDG
SENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIH
NEDFPALPGSSYKDPTSSNDDSKSNLNTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKG
IQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSP
ENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYM
NGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWR
KVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF"
BASE COUNT 581 a 396 c 390 g 414 t
ORIGIN
1 gtcgccatct tggatccgcg ggacaagaaa attcatgcga gggagacgtg gtgggcggtc
61 cttcctgtga cacgaccctt gagtgacagt tctatttgat tgcctccggt actgtgagga
121 aaggacacga ctctatggtg aggactgatg gacatacatt atctgagaaa agaaactacc
181 aggtgacaaa cagcatgttt ggtgcttcaa gaaagaagtt tgtagagggg gtcgacagtg
241 actaccatga cgaaaacatg tactacagcc agtcttctat gtttccacat cggtcagaaa
301 aagatatgct ggcatcacca tctacatcag gtcagctgtc tcagtttggg gcaagtttat
361 acgggcaaca aagtgcacta ggccttccaa tgagggggat gagcaacaat acccctcagt
421 taaatcgcag cttatcacaa ggcactcagt taccgagcca cgtcacgcca acaacagggg
481 taccaacaat gtcacttcac acgcctccat ctccaagcag gggtattttg cctatgaatc
541 ctaggaatat gatgaaccac tcccaggttg gtcagggcat tggaattcct agcaggacaa
601 atagcatgag cagttcaggg ttaggtagcc ccaacagaag ctcgccaagc ataatatgta
661 tgccaaagca gcagccttct cgacagcctt ttactgtgaa cagtatgtct ggatttggaa
721 tgaacaggaa tcaggcattt ggaatgaata actccttatc aagtaacatt tttaatggaa
781 cagacggaag tgaaaatgtg acaggattgg acctttcaga tttcccagca ttagcagacc
841 gaaacaggag ggaaggaagt ggtaacccaa ctccattaat aaaccccttg gctggaagag
901 ctccttatgt tggaatggta acaaaaccag caaatgaaca atcccaggac ttctcaatac
961 acaatgaaga ttttccagca ttaccaggct ccagctataa agatccaaca tcaagtaatg
1021 atgacagtaa atctaatttg aatacatctg gcaagacaac ttcaagtaca gatggaccca
1081 aattccctgg agataaaagt tcaacaacac aaaataataa ccagcagaaa aaagggatcc
1141 aggtgttacc tgatggtcgg gttactaaca ttcctcaagg gatggtgacg gaccaatttg
1201 gaatgattgg cctgttaaca tttatcaggg cagcagagac agacccagga atggtacatc
1261 ttgcattagg aagtgactta acaacattag gcctcaatct gaactctcct gaaaatctct
1321 accccaaatt tgcgtcaccc tgggcatctt caccttgtcg acctcaagac atagacttcc
1381 atgttccatc tgagtactta acgaacattc acattaggga taagctggct gcaataaaac
1441 ttggccgata tggtgaagac cttctcttct atctctatta catgaatgga ggagacgtat
1501 tacaactttt agctgcagtg gagcttttta accgtgattg gagataccac aaagaagaac
1561 gagtatggat taccagggca ccaggcatgg agccaacaat gaaaaccaat acctatgaga
1621 ggggaacata ttacttcttt gactgtctta actggaggaa agtagctaag gagttccatc
1681 tggaatatga caaattagaa gaacggcctc acctgccatc caccttcaac tacaaccctg
1741 ctcagcaagc cttctaaaaa aaaaaaaaaa aaaaaaaaaa a
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