LOCUS BC010954 1207 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 10, mRNA (cDNA clone
MGC:13622 IMAGE:4274617), complete cds.
ACCESSION BC010954
VERSION BC010954.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1207)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1207)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504700.
FEATURES Location/Qualifiers
source 1..1207
/db_xref="H-InvDB:HIT000035143"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13622 IMAGE:4274617"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1207
/gene="CXCL10"
/gene_synonym="C7"
/gene_synonym="crg-2"
/gene_synonym="gIP-10"
/gene_synonym="IFI10"
/gene_synonym="IP-10"
/gene_synonym="mob-1"
/db_xref="GeneID:3627"
/db_xref="HGNC:HGNC:10637"
/db_xref="MIM:147310"
CDS 71..367
/gene="CXCL10"
/gene_synonym="C7"
/gene_synonym="crg-2"
/gene_synonym="gIP-10"
/gene_synonym="IFI10"
/gene_synonym="IP-10"
/gene_synonym="mob-1"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 10"
/protein_id="AAH10954.1"
/db_xref="GeneID:3627"
/db_xref="HGNC:HGNC:10637"
/db_xref="MIM:147310"
/translation="MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRS
LEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP"
BASE COUNT 414 a 232 c 213 g 348 t
ORIGIN
1 gggggagaca ttcctcaatt gcttagacat attctgagcc tacagcagag gaacctccag
61 tctcagcacc atgaatcaaa ctgccattct gatttgctgc cttatctttc tgactctaag
121 tggcattcaa ggagtacctc tctctagaac tgtacgctgt acctgcatca gcattagtaa
181 tcaacctgtt aatccaaggt ctttagaaaa acttgaaatt attcctgcaa gccaattttg
241 tccacgtgtt gagatcattg ctacaatgaa aaagaagggt gagaagagat gtctgaatcc
301 agaatcgaag gccatcaaga atttactgaa agcagttagc aaggaaaggt ctaaaagatc
361 tccttaaaac cagaggggag caaaatcgat gcagtgcttc caaggatgga ccacacagag
421 gctgcctctc ccatcacttc cctacatgga gtatatgtca agccataatt gttcttagtt
481 tgcagttaca ctaaaaggtg accaatgatg gtcaccaaat cagctgctac tactcctgta
541 ggaaggttaa tgttcatcat cctaagctat tcagtaataa ctctaccctg gcactataat
601 gtaagctcta ctgaggtgct atgttcttag tggatgttct gaccctgctt caaatatttc
661 cctcaccttt cccatcttcc aagggtacta aggaatcttt ctgctttggg gtttatcaga
721 attctcagaa tctcaaataa ctaaaaggta tgcaatcaaa tctgcttttt aaagaatgct
781 ctttacttca tggacttcca ctgccatcct cccaaggggc ccaaattctt tcagtggcta
841 cctacataca attccaaaca catacaggaa ggtagaaata tctgaaaatg tatgtgtaag
901 tattcttatt taatgaaaga ctgtacaaag tagaagtctt agatgtatat atttcctata
961 ttgttttcag tgtacatgga ataacatgta attaagtact atgtatcaat gagtaacagg
1021 aaaattttaa aaatacagat agatatatgc tctgcatgtt acataagata aatgtgctga
1081 atggttttca aaataaaaat gaggtactct cctggaaata ttaagaaaga ctatctaaat
1141 gttgaaagat caaaaggtta ataaagtaat tataactcaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaa
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