LOCUS BC010907 1508 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PAK1 interacting protein 1, mRNA (cDNA clone MGC:13426
IMAGE:4251347), complete cds.
ACCESSION BC010907
VERSION BC010907.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1508)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1508)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55769545.
FEATURES Location/Qualifiers
source 1..1508
/db_xref="H-InvDB:HIT000035111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13426 IMAGE:4251347"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1508
/gene="PAK1IP1"
/gene_synonym="bA421M1.5"
/gene_synonym="FLJ20624"
/gene_synonym="hPIP1"
/gene_synonym="MAK11"
/gene_synonym="PIP1"
/gene_synonym="RP11-421M1.5"
/gene_synonym="WDR84"
/db_xref="GeneID:55003"
/db_xref="HGNC:HGNC:20882"
/db_xref="MIM:607811"
CDS 36..1214
/gene="PAK1IP1"
/gene_synonym="bA421M1.5"
/gene_synonym="FLJ20624"
/gene_synonym="hPIP1"
/gene_synonym="MAK11"
/gene_synonym="PIP1"
/gene_synonym="RP11-421M1.5"
/gene_synonym="WDR84"
/codon_start=1
/product="PAK1 interacting protein 1"
/protein_id="AAH10907.1"
/db_xref="GeneID:55003"
/db_xref="HGNC:HGNC:20882"
/db_xref="MIM:607811"
/translation="MELVAGCYEQVLFGFAVHPEPEACGDHEQWTLVADFTHHAHTAS
LSAVAVNSRFVVTGSKDETIHIYDMKKKIEHGALVHHSGTITCLKFYGNRHLISGAED
GLICIWDAKKWECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFI
KNIKQNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISGTVTNEKRISSVKFLSESVL
AVAGDEEVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIPEHHVIVSASSDGFIKMWKL
EQDKKVPPSLLCEINTNARLTCLGVWLDKVADMKESLPPAAEPSPVSKEQSKIGKKEP
GDTVHKEEKRSKPNTKKRGLTGDSKKATKESGLISTKKRKMVEMLEKKRKKKKIKTMQ
"
BASE COUNT 521 a 260 c 334 g 393 t
ORIGIN
1 gggggggctg gcggaagagg cacgtgcgct gctgaatgga gctggtcgct ggttgctacg
61 agcaggtcct ctttgggttc gctgtacacc cggagcccga ggcttgcggc gaccacgagc
121 aatggactct tgtggctgac ttcactcacc atgctcacac tgcctccttg tcagcagtag
181 ctgtaaatag tcgttttgtg gtcactggga gcaaagatga aacaattcac atttatgaca
241 tgaaaaagaa gattgagcat ggggctctag tgcatcacag tggtacaata acttgcctga
301 aattctatgg caacaggcat ttaatcagtg gagcggaaga tggactcatc tgtatctggg
361 atgcaaagaa atgggaatgc ctgaagtcaa ttaaagctca caaaggacag gtgaccttcc
421 tttctattca cccatctggc aagttggccc tgtcggttgg tacagataaa actttaagaa
481 cgtggaatct tgtagaagga agatcagcat tcataaaaaa tataaaacaa aatgctcaca
541 tagtagaatg gtccccaaga ggagagcagt atgtagttat catacagaat aaaatagaca
601 tctatcagct tgacactgca tccattagtg gcaccgtcac aaatgaaaag agaatttcct
661 ctgttaaatt tctttcagag tctgtccttg cagtggctgg agatgaagaa gttataaggt
721 tttttgactg tgattcacta gtgtgcctct gcgaatttaa agctcatgaa aacagggtaa
781 aggacatgtt cagttttgaa attccagagc atcatgttat tgtttcagca tcgagtgatg
841 gtttcatcaa aatgtggaag cttgagcagg ataagaaagt tcccccatct ttactctgtg
901 aaataaacac taatgccagg ctgacgtgtc ttggagtgtg gctagacaaa gtggcagaca
961 tgaaagaaag ccttcctcca gctgcagagc cttctcctgt aagtaaagaa cagtccaaaa
1021 ttggcaaaaa ggagcctggt gacacagtgc acaaagaaga aaagcggtca aaacctaaca
1081 caaagaaacg cggtttaaca ggtgacagta agaaagcaac aaaagaaagt ggcctgatat
1141 caaccaagaa gaggaaaatg gtagaaatgt tggaaaagaa gaggaaaaag aagaaaataa
1201 aaacaatgca gtgaatcaca gatgtctcct gaaagaactc ttttagatga aatcattcta
1261 ctcaaatgta ccttaatttt tttttttttt ccctgagtaa aagcaagaaa tttcttcctt
1321 tggaaaaaat atatatatta aaaaaccact tttagatggt tttttttaaa aaaaaaaaaa
1381 aaaactggta aaattacttt tggcaggcag tgttttatga attatgtatc atgttgatat
1441 ataatatgtt gatgtgtcat gtaattttta ctttgtacaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaa
//