LOCUS BC010741 1844 bp mRNA linear HUM 04-JUN-2004
DEFINITION Homo sapiens tRNA isopentenyltransferase 1, mRNA (cDNA clone
IMAGE:3905836), partial cds.
ACCESSION BC010741
VERSION BC010741.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1844)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923064.
FEATURES Location/Qualifiers
source 1..1844
/db_xref="H-InvDB:HIT000035063"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3905836"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1844
/gene="TRIT1"
/gene_synonym="FLJ20061"
/gene_synonym="IPT"
/gene_synonym="MOD5"
/db_xref="GeneID:54802"
CDS <1..1140
/gene="TRIT1"
/gene_synonym="FLJ20061"
/gene_synonym="IPT"
/gene_synonym="MOD5"
/codon_start=1
/product="TRIT1 protein"
/protein_id="AAH10741.2"
/db_xref="GeneID:54802"
/translation="ARAVPVGSGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGE
IVSADSMQPQEMGTEKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPHDKRKVARS
LQVFEETGISHSEFLHRQHTEEGGGPLGGPLKFSNPCILWLHADQADERLDKRVDDML
AAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTLETSNQL
LKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVYGLEVSDVSKWEESVLEPAL
EIVQSFIQGHKPTATPIKMPYNEAENKRSYHLCDLCDRIIIGDREWAAHIKSKSHLNQ
LKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSPGQNDQELKCSV"
BASE COUNT 545 a 374 c 454 g 471 t
ORIGIN
1 gcacgagcag ttcccgtggg cagtgggctc aggggcctgc aacggaccct acctcttgta
61 gtgattctcg gggccacggg caccggcaaa tccacgctgg cgttgcagct aggccagcgg
121 ctcggcggtg agatcgtcag cgctgactcc atgcagcccc aggagatggg cactgagaaa
181 gtgattgacc gaaaagtgga gcttgaaaag gaggatggtc ttgtacttca caaacgccta
241 agccaggtgg acccagaaat ggctgccaag ctgcatccac atgacaaacg caaagtggcc
301 aggagcttgc aagtttttga agaaacagga atctctcata gtgaatttct ccatcgtcaa
361 catacggaag aaggtggtgg tccccttgga ggtcctctga agttctctaa cccttgcatc
421 ctttggcttc atgctgacca ggcagatgag cgcttggata agagggtgga tgacatgctt
481 gctgctgggc tcttggagga actaagagat tttcacagac gctataatca gaagaatgtt
541 tcggaaaata gccaggacta tcaacatggt atcttccaat caattggctt caaggaattt
601 cacgagtacc tgatcactga gggaaaatgc acactggaga ctagtaacca gcttctaaag
661 aaaggtattg aggctctgaa acaagtaact aagagatatg cccggaaaca aaaccgatgg
721 gttaaaaacc gttttttgag cagacctggt cccattgtcc cccctgtcta tggcttagag
781 gtatctgatg tctcgaagtg ggaagagtct gttcttgaac ctgctcttga aatcgtgcaa
841 agtttcatcc agggccacaa gcctacagcc actccaataa agatgccata caatgaagct
901 gagaacaaga gaagttatca cctgtgtgac ctctgtgatc gaatcatcat tggggatcgc
961 gaatgggcag cgcacataaa atccaaatcc cacttgaacc aactgaagaa aagaagaaga
1021 ttggactcag atgctgtcaa caccatagaa agtcagagtg tttccccaga ccataacaaa
1081 gaacctaaag agaagggatc cccagggcag aatgatcaag agctgaaatg cagcgtttaa
1141 gagacatgtc cagtggcctt tggaaaggtg gtggggatcc agttcaggag ggaggggtat
1201 gtttgtctcc cagtctgggc aaaggagtgc tatgcggaat tctctgcata gcagaaaagc
1261 tcccaccatt ttcttttgat gtggttttaa agtctcacgt tctctataat agaaacagca
1321 ggtcttgtca gctccttgtg tggctgatgt gtctggaaat gatgtagttc aggaaagcat
1381 tttttttttc tttgaacctt aaaggttcta ttattaaaag cagcacagat tccacatttt
1441 tatacatgag gatcttcttt gtggtgaata ccaggattga ctgcatccct ttaaagaagt
1501 tttatgtccc tgactctggc taaaattatc taatttccag atgcttttgt agatgactga
1561 agtatttgtg agccacatat tgggagttct agatttgagt gaatggcagg aaagggccat
1621 ctccattgag atgattaagt gaaccaaact agttctcaga attctacaga gaaggaggga
1681 atcagactga ggaagctgtg acataggact tgaagaccaa agactttgaa atttgcgagc
1741 tgctcatgtg tgagttatta tcactgctgt ctttctattg agttacaaat ctatattttt
1801 attgaagttt aaataaagaa aaaatttaca aaaaaaaaaa aaaa
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