LOCUS BC010620 2964 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens solute carrier family 38, member 1, mRNA (cDNA clone
MGC:17722 IMAGE:3871101), complete cds.
ACCESSION BC010620
VERSION BC010620.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2964)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2964)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361928.
FEATURES Location/Qualifiers
source 1..2964
/db_xref="H-InvDB:HIT000035015"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17722 IMAGE:3871101"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2964
/gene="SLC38A1"
/gene_synonym="ATA1"
/gene_synonym="NAT2"
/gene_synonym="SAT1"
/gene_synonym="SNAT1"
/db_xref="GeneID:81539"
/db_xref="HGNC:HGNC:13447"
/db_xref="MIM:608490"
CDS 316..1779
/gene="SLC38A1"
/gene_synonym="ATA1"
/gene_synonym="NAT2"
/gene_synonym="SAT1"
/gene_synonym="SNAT1"
/codon_start=1
/product="solute carrier family 38, member 1"
/protein_id="AAH10620.1"
/db_xref="GeneID:81539"
/db_xref="HGNC:HGNC:13447"
/db_xref="MIM:608490"
/translation="MMHFKSGLELTELQNMTVPEDDNISNDSNDFTEVENGQINSKFI
SDRESRRSLTNSHLEKKKCDEYIPGTTSLGMSVFNLSNAIMGSGILGLAFALANTGIL
LFLVLLTSVTLLSIYSINLLLICSKETGCMVYEKLGEQVFGTTGKFVIFGATSLQNTG
AMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRVLVVIVTFGIILPLCLLKNLGYL
GYTSGFSLSCMVFFLIVVIYKKFQIPCIVPELNSTISANSTNADTCTPKYVTFNSKTV
YALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFY
DNVQSDLLHKYQSKDDILILTVRLAVIVAVILTVPVLFFTVRSSLFELAKKTKFNLCR
HTVVTCILLVVINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITDQDGDKGT
QRIWAALFLGLGVLFSLVSIPLVIYDWACSSSSDEGH"
BASE COUNT 844 a 609 c 567 g 944 t
ORIGIN
1 ggcctgtccg cgttaaacca tcacaagcca tggttgcgga agggccacgc gtcccccagt
61 aggagaatga ctccgattcg tgaccctcag cgccggtgca tgtcgatata tttattgagt
121 gtctactgtg tgccaggcac tatatctatg tgcatagaaa aaccctggaa ggccatacaa
181 caatatatat agagtgatcg tctctgcttg ctgagctaac aggggtgtca agcttccatt
241 ttggtatcta cttctaaata cactcagaac aggagaaatt tggactaatt ttcaaactac
301 agacactttc taatcatgat gcatttcaaa agtggactcg aattaactga gttgcaaaac
361 atgacagtgc ccgaggatga taacattagc aatgactcca atgatttcac cgaagtagaa
421 aatggtcaga taaatagcaa gtttatttct gatcgtgaaa gtagaagaag tctcacaaac
481 agccatttgg aaaaaaagaa gtgtgatgag tatattccag gtacaacctc cttaggcatg
541 tctgttttta acctaagcaa cgccattatg ggcagtggga ttttgggact cgcctttgcc
601 ctggcaaaca ctggaatcct actttttctg gtacttttga cttcagtgac attgctgtct
661 atatattcaa taaacctcct attgatctgt tcaaaagaaa caggctgcat ggtgtatgaa
721 aagctggggg aacaagtctt tggcaccaca gggaagttcg taatctttgg agccacctct
781 ctacagaaca ctggagcaat gctgagctac ctcttcatcg taaaaaatga actaccctct
841 gccataaagt ttctaatggg aaaggaagag acattttcag cctggtacgt ggatggccgc
901 gttctggtgg tgatagttac ctttggcata attctccctc tgtgtctctt gaagaactta
961 gggtatcttg gctatactag tggattttcc ttgagctgta tggttttttt cctaattgtg
1021 gttatttaca agaaatttca aattccctgc attgttccag agctaaattc aacaataagt
1081 gctaattcaa caaatgctga cacgtgtacg ccaaaatatg ttaccttcaa ttcaaagacc
1141 gtgtatgctt tacccaccat tgcatttgca tttgtttgcc acccgtcagt cctgccaatt
1201 tacagtgagc ttaaagaccg atcacagaaa aaaatgcaga tggtttcaaa catctccttt
1261 ttcgccatgt ttgttatgta cttcttgact gccatttttg gctacttgac attctatgac
1321 aacgtgcagt ccgacctcct tcacaaatat cagagtaaag atgacattct catcctgaca
1381 gtgcggctgg ctgtcattgt tgctgtgatc ctcacagtgc cggtgttatt tttcacggtt
1441 cgttcatctt tatttgaact ggctaagaaa acaaagttta atttatgtcg tcataccgtg
1501 gttacctgca tactcttggt tgttatcaac ttgttggtga tcttcatacc ctccatgaag
1561 gatatttttg gagtcgtagg agttacatct gctaacatgc ttattttcat tcttccttca
1621 tctctttatt taaaaatcac agaccaggat ggagataaag gaactcaaag aatttgggct
1681 gcccttttct tgggcctggg ggtgttgttc tccttggtca gcattccctt ggtcatctat
1741 gactgggcct gctcatcgag tagtgacgaa ggccactgaa acccgccgag aaaaagaaac
1801 atccctgttg tctgctcagt caagtcccca cacatcagca atctctcacc acttcttttg
1861 caagtttaca gaagcaaaca gaaatgtaca ggatacttaa aatggaataa ctttttggtt
1921 gcaaaacaga gacatggttc tataatgctt catgtccctc caagatttga gatcaattta
1981 gggattgtga attttttttt tcaaatttca tacaatcata tttcccagta cttttcacaa
2041 tcatttttta cccatctaac tctatgtttt gtggcttccc ggtctcttag aactttgaaa
2101 acatgatata caataatgtt tatttattat acatccagat tctgaaataa ttttcctact
2161 gatgttcagc tcacactatc tgtacctttt tagaagagaa aagaatcttg aattgtatat
2221 atttattttg ctttacagaa aaaaatggtt tcgtaaataa tttgcctatt ttggttaaca
2281 tagcacatgg agataatcat ctgaaagtta tagggcactg ccactgctga atcagagcat
2341 gcccaatatt tgaggtggct ctgatttcct ggcagctgaa ctcgggtagt ccagtggcct
2401 agctggtacc acatctattc ccatccagag acattctctg gcaagtgttc tcagctgaaa
2461 agtggttggg gatgattctt accttggtaa ttaaatgaag ctacacattt gggtaatcta
2521 gcaaatgaag tattttttcc ctcttggcaa cttgtgtcag agttactctg gtctgagtca
2581 actttcgctg gggaaaacct atggaaccta ctgcaaaaag attgtccaaa atgcctaaga
2641 aaatactcct ctgatgcatt tagccttcaa ccctacctgt cttgctgaag ggagaaaaat
2701 gttttagtac attataggcc cagcagcttt tattcatgtc caccagctag ttgcacagag
2761 aatcatgtgt acctaactaa ggatgatcta ggataagtaa ctcctgtttt atattgagta
2821 ttttagggaa gtctttaaaa gacttgtttt atatctataa atctaggtta ttacaaatac
2881 aagaattttg taccttaaat aagcctcatt tctatttctt cttcattaat tctccatcta
2941 gtcttgtgaa aaaaaaaaaa aaaa
//