LOCUS BC010579 1855 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 114, mRNA (cDNA clone
MGC:16957 IMAGE:4213299), complete cds.
ACCESSION BC010579
VERSION BC010579.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679911.
FEATURES Location/Qualifiers
source 1..1855
/db_xref="H-InvDB:HIT000258940"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16957 IMAGE:4213299"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1855
/gene="C9orf114"
/gene_synonym="DKFZP566D143"
/gene_synonym="HSPC109"
/gene_synonym="RP11-545E17.7"
/db_xref="GeneID:51490"
/db_xref="HGNC:HGNC:26933"
CDS 4..1134
/gene="C9orf114"
/gene_synonym="DKFZP566D143"
/gene_synonym="HSPC109"
/gene_synonym="RP11-545E17.7"
/codon_start=1
/product="chromosome 9 open reading frame 114"
/protein_id="AAH10579.1"
/db_xref="GeneID:51490"
/db_xref="HGNC:HGNC:26933"
/translation="MAERGRKRPCGPGEHGQRIEWRKWKQQKKEEKKKWKDLKLMKKL
ERQRAQEEQAKRLEEEEAAAEKEDRGRPYTLSVALPGSILDNAQSPELRTYLAGQIAR
ACAIFCVDEIVVFDEEGQDAKTVEGEFTGVGKKGQACVQLARILQYLECPQYLRKAFF
PKHQDLQFAGLLNPLDSPHHMRQDEESEFREGIVVDRPTRPGHGSFVNCGMKKEVKID
KNLEPGLRVTVRLNQQQHPDCKTYHGKVVSSQDPRTKAGLYWGYTVRLASCLSAVFAE
APFQDGYDLTIGTSERGSDVASAQLPNFRHALVVFGGLQGLEAGADADPNLEVAEPSV
LFDLYVNTCPGQGSRTIRTEEAILISLAALQPGLTQAGARHT"
BASE COUNT 419 a 543 c 550 g 343 t
ORIGIN
1 aacatggcgg agcgcggcag gaagcggccg tgcggcccgg gtgaacacgg ccaaaggatt
61 gagtggcgaa aatggaagca acagaagaaa gaggagaaaa aaaaatggaa ggatctcaag
121 ctgatgaaaa aactggagcg gcagcgggca caggaggaac aggcaaagcg cctggaagag
181 gaggaggcag cggcagagaa ggaggaccgc gggcggccct acacactgag cgtagccctg
241 ccgggctcca tcctggacaa tgctcagtcg ccggagcttc gcacctactt ggccggtcag
301 attgccagag cctgtgccat cttctgtgtg gatgagatcg tggtgtttga tgaggagggc
361 caggatgcca agactgtgga gggggaattc acaggagttg ggaagaaggg gcaggcgtgc
421 gtacagctgg cccggatcct gcagtacctg gagtgtccac agtacctgag gaaggcgttc
481 ttccccaagc accaggatct acagtttgca gggctcctga accccctgga cagcccccac
541 cacatgcgtc aggatgagga atccgagttc cgagagggca tcgtggtgga tcggcccacc
601 cggccaggcc acggctcctt tgtcaactgt ggcatgaaaa aggaggtgaa gattgacaag
661 aacctggagc ccgggcttcg ggtgactgtg cgactgaacc agcagcagca cccagactgc
721 aagacctacc atggcaaagt ggtatcatcg caggaccctc gcaccaaagc tggtctctac
781 tggggctaca ccgtccgact ggcttcctgc ctcagtgctg tgtttgctga ggcccccttc
841 caagatgggt atgacctgac catcgggacg tcagagcgcg gctcagatgt ggcctctgcc
901 cagcttccca acttcaggca tgctcttgtg gtgttcgggg gcctccaggg tctggaagct
961 ggagcggatg ctgaccccaa cctggaggtg gctgaaccca gtgtcctctt tgacctgtac
1021 gtcaatacct gtcctggcca gggtagccgt accatccgca cggaggaagc catcctcatc
1081 tccctggccg ccctgcagcc tggcctcacc caggcgggtg cccggcacac ctgaaagttc
1141 taaggggccg aggacatcag tgaagcagca gtgaaaccag gggctctgca ggtcacttgg
1201 gacggacgcc accagacttg tctccaaaaa tcaccacctt taatactccc cggcctgcac
1261 acacccacag tctcactggg ctccaccctc acttactgcc cgccgtgatg gccttgaggc
1321 tgcctgcccg cgccaggatg tttggcacaa agagcagccc cgaagcccgc tcaatgctct
1381 cgatgggcac caggaagcgc tccagtggga tggcctcatc cacaggtgcg ttgggcatca
1441 cgtaggtgcg gagctcaatt tgcccacctg ctgcctccag gatcagcacc ttgaagaagt
1501 gtgtgggcac tgccacgtgg ttcttgccga tgacctggta ctttacgtag gatttcccat
1561 cagcctctgt cctgtgggca gacccaggca cacgtgggca gggggcctgg atgaacccaa
1621 agccacctct tccaggcagc cttccctgat ctgtcctcta acttctgtca acctgcagga
1681 ccacgccctc actgtgagac ttctgtagcc tgcctggctc ctccttgagg ctggaactct
1741 ctccagggtg gttaactctt tccctctgtt ttccttatgc ccaacactgg gtcaggcaga
1801 gtgggcgaca ataaacgctg ctaggagaat cgaaaaaaaa aaaaaaaaaa aaaaa
//