LOCUS       BC010239                2164 bp    mRNA    linear   HUM 23-AUG-2004
DEFINITION  Homo sapiens ataxin 2-like, mRNA (cDNA clone IMAGE:4153822),
            partial cds.
ACCESSION   BC010239
VERSION     BC010239.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Director MGC Project.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Sep 16, 2003 this sequence version replaced BC010239.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 19 Row: p Column: 8
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis.
FEATURES             Location/Qualifiers
     source          1..2164
                     /db_xref="H-InvDB:HIT000087462"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4153822"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..2164
                     /gene="ATXN2L"
                     /gene_synonym="A2D"
                     /gene_synonym="A2LG"
                     /gene_synonym="A2LP"
                     /gene_synonym="A2RP"
                     /db_xref="GeneID:11273"
                     /db_xref="MIM:607931"
     CDS             <1..1206
                     /gene="ATXN2L"
                     /gene_synonym="A2D"
                     /gene_synonym="A2LG"
                     /gene_synonym="A2LP"
                     /gene_synonym="A2RP"
                     /codon_start=1
                     /product="ATXN2L protein"
                     /protein_id="AAH10239.1"
                     /db_xref="GeneID:11273"
                     /db_xref="MIM:607931"
                     /translation="NKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHM
                     GPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPP
                     LVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIV
                     SSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
                     VQQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHH
                     QQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQS
                     GVPALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRAEGLQVG
                     QDARVLGGE"
BASE COUNT          428 a          782 c          544 g          410 t
ORIGIN      
        1 aataaatcca ccagtacccc aacttctccg gggccccgga ctcattcaac tccctccatc
       61 ccggtgctga cagcaggcca gagtgggcta tacagccccc agtacatctc ctacatacct
      121 cagatccaca tgggaccagc tgtgcaggca cctcagatgt atccatatcc tgtatccaat
      181 tcagtgcctg ggcagcaggg caagtaccgg ggagcaaaag gctcccttcc tccgcagcgc
      241 tcggaccaac accagccagc ctcagccccg ccgatgatgc aggccgccgc ggctgctggc
      301 ccgcctctgg tggctgccac gccctattct tcctacatcc cctacaaccc tcagcagttc
      361 ccaggccagc cagccatgat gcagcccatg gcccactacc cctcacagcc ggtgtttgcc
      421 cccatgcttc agagcaaccc acgcatgctg acgtcgggca gccatcccca ggccatcgtg
      481 tcatcctcta cccctcagta cccttctgca gagcagccta ccccccaagc cctttatgcc
      541 actgttcacc agtcctaccc acaccatgcc acacagctcc atgcccacca gccgcagccg
      601 gctaccacgc ctactggaag ccagccgcag tcccagcatg cggcccccag tcctgtccag
      661 cagcatcagg cggggcaggc cccacacttg ggcagtggac agccacagca gaatctgtac
      721 cacccagggg ccctgacagg cacgccgccc tctctgccac cgggaccttc tgcccagtcc
      781 cctcagagca gcttccccca gccagccgct gtgtatgcca tccaccacca gcagctgccc
      841 cacggcttca ccaacatggc ccatgttacc caggcccatg tccaaactgg aatcacagca
      901 gccccgcccc ctcaccctgg ggctccccac ccgccccagg tgatgctgct gcacccaccc
      961 cagagtcatg gggggccccc ccaaggcgcg gtgccccaga gtggggtgcc tgcactctca
     1021 gcttccacac cctcacccta cccctacatc ggacaccccc aaggtgagca gcctggccag
     1081 gcgcctggat ttccaggagg agccgatgac aggattcgtg agttctcatt agctggggga
     1141 atttggcatg gaagagctga ggggctgcag gtggggcagg atgcacgggt tctgggtggg
     1201 gagtgagggg tcttggaggc agggctgtcc cacagggcgc ccgccgacct gcacctgtct
     1261 gtgaagtatg tagggtgggc agaagccaca gtcgccgccg ccaggggctt gctcctggct
     1321 ctgtcctttg cttccctccg tcctcgctca gttgtgatcc agcagccccc ctccccactg
     1381 cctccccagc tctcagtgac cccgactgtc tcctgactta gccgaggtaa ggtcagtgca
     1441 gcagacaggg ccagactggg gtgtgggggg ctgagctggg cacatgagtg agggctctgg
     1501 cttactggga aacagcgatt gacctgtgct tctgacagcc cccgagacac cttgaggagg
     1561 ccgctccttc ccagacacac ccccacgccc ccactggacg gcattggagg aagggacagc
     1621 tgcttgggtt ctaatgctcc tgctctcttc tctttcccct ccaaccagtt caatctcatc
     1681 cctcccagca gctccccttc caccccccgg ggaactgaag attgtcctgg ccgcgacctg
     1741 agacctccat gagtggaggg aagagtgatc tatgtctctt cccccagcag ctcggaccac
     1801 tcccagcccc ccatcccccc gttccccagg ggagctgggg aattcctgcc aagcaccttg
     1861 aatgggaggg gcctcacaga gggcagggcc agggtccagc aggggtgggg ggttcctgct
     1921 ctgcccctgc ccgtccccac ccagtcttgc cctcccatcc tctcatctat tcccccgctg
     1981 gagacggaag atcttttatt ttctattatt tataacttca gacttgggcc ccctgttctt
     2041 tctttcccat taacttgagt gacctgtgtg agagacagac agatgcccca cgaggatggc
     2101 tggacaagga cttttacttt ttattacata aaaatattaa aaaataaata aaaaaaaaaa
     2161 aaaa
//