LOCUS BC010094 2127 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
Q, mRNA (cDNA clone IMAGE:3357878), with apparent retained intron.
ACCESSION BC010094
VERSION BC010094.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2127)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2127)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC010094.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538449
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2127
/db_xref="H-InvDB:HIT000034794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3357878"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 301 a 732 c 674 g 420 t
ORIGIN
1 cccgccgccc gagcgcgcgg ccccggaagc acccgcctcc cggcatggtg ctcaaggcct
61 tcttccccac gtgctgcgtc tcggcggaca gcgggctgct ggtgggacgg tgggtgccgg
121 agcagagcag cgccgtggtc ctggcggtcc tgcactttcc cttcatcccc atccaggtca
181 agcagctcct ggcccaggtg cggcaggcca gccaggtggg cgtggccgtg ctgggcacct
241 ggtgccactg ccggcaggag cccgaggaga gcctgggccg cttcctggag agcctgggtg
301 ctgtcttccc ccatgagccc tggctgcggc tgtgccggga gagaggcggc acgttctgga
361 gctgcgaggc cacccaccgg caagcgccca ctgcccccgg tgcccctggt gaggaccagg
421 tcatgctcat cttctatgac cagcgccagg tgttgctgtc acagctacac ctgcccaccg
481 tcctgcccga ccgccaggct ggagccacca ctgccagcac ggggggcctg gctgccgtct
541 tcgacacggt agcacgcagt gaggtgctct tccgcagtga ccgctttgat gagggccccg
601 tgcggctgag ccactggcag tcggagggcg tggaggccag catcctcgcg gagctggcca
661 ggcgagcctc gggacccatt tgtctgctgt tggccagcct gctgtcgctg gtctcagctg
721 tcagtgcctg ccgagtgttc aagctctggc ccctgtcctt cctcgggagc aaactctcca
781 cgtgcgaaca gctccggcac cggctggagc acctcacgct aatcttcagt acacggaagg
841 cggagaaccc tgcccagctg atgaggtgtg ggcctgccct ggtctctgca gggctgggtg
901 cgtgccctct ggccccttct ccatccccct ctgcaccacg ctgacccctc cggccaggca
961 ggcctcctcc tgcggcccca ggctgtgctg gccaccctca tgccggccgg gccggacctc
1021 ccttccagga aggccaacac ggtggcctct gtgctgctgg acgtggccct gggcctcatg
1081 ctgctgtcct ggctccacgg gagaagccgc atcgggcatc tggccgacgc cctcgttcct
1141 gtggctgacg tgagtggact ggggtggagc ccggtgtccc gggtgggcgt ggggacccct
1201 cctgggcagc agagccttcc cgggccagag ccaccgcccc ccaaagccag ttctaccttc
1261 tccatgctct ggagacacgg ccctcccctg aaccagaagc aggaactcca ggggcgctgg
1321 ggcctgggca gggcaggcct cgcaggtaca cccccctttc cttctgaagg ggctgtgtgc
1381 aggagccagc cgggctgagg ctctggggag cccgcctctc cctgtgggcc cagcgtcctg
1441 gtatctccct tgtggtccct gagatcagcg ttgccctcct ggctctctgg ggccctctgc
1501 agagccaggg tcatgaaacc tttcctgtcc agggaggccc atgtgcagcc cagctgggac
1561 ttcctgccct gcccctgtgc tgattctgta actcctgtgc tgagagccag aggcacagct
1621 tgtctcccat ctcccacctt ccctgcatgg tctgtgcccc gtttccagcc gggtgcagcc
1681 ccctcctctg cagatctagt gcatttccat gctgcctctg ggccttcagc ttctctgtct
1741 tcctccctca gcaccaaagc cccgtctctt ccattaggag cttgtcttcc tgctgggggt
1801 ggtacctgac tctttggccc accctcgggc ctctgtggag gcctccttga ggcctgactg
1861 ggtgggtctt gtgtgggctg caggtgtgca ctgggcctgc ttgtggccag gccaggcctc
1921 tgggggcagc atcaggcacg tctgtgtggc tgtgggggtg cagggagctc cagcccagaa
1981 ggaaggaggg gcggggctgg ggaaggggct cggcagcttt gcctgtggtc gtccgcacct
2041 gccaccggcc tactttgtcc tagacctccc ttttgcaaaa gtgctcagaa atataaatat
2101 ttaatttaaa aaaaaaaaaa aaaaaaa
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