LOCUS BC009747 1588 bp mRNA linear HUM 18-JAN-2007 DEFINITION Homo sapiens vacuolar protein sorting 26 homolog B (S. pombe), mRNA (cDNA clone MGC:10485 IMAGE:3938319), complete cds. ACCESSION BC009747 VERSION BC009747.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1588) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1588) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC009747.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 14 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147470. FEATURES Location/Qualifiers source 1..1588 /db_xref="H-InvDB:HIT000034547" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10485 IMAGE:3938319" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1588 /gene="VPS26B" /gene_synonym="Pep8b" /db_xref="GeneID:112936" /db_xref="HGNC:HGNC:28119" /db_xref="MIM:610027" CDS 435..1445 /gene="VPS26B" /gene_synonym="Pep8b" /codon_start=1 /product="vacuolar protein sorting 26 homolog B (S. pombe)" /protein_id="AAH09747.1" /db_xref="GeneID:112936" /db_xref="HGNC:HGNC:28119" /db_xref="MIM:610027" /translation="MSFFGFGQSVEVEILLNDAESRKRAEHKTEDGKKEKYFLFYDGE TVSGKVSLALKNPNKRLEHQGIKIEFIGQIELYYDRGNHHEFVSLVKDLARPGEITQS QAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKEMDIVVHTLSTYPELNS SIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTG PNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL IDEEERRYFKQQEVVLWRKGDIVRKSMSHQAAIASQRFEGTTSLGEVRTPSQLSDNNC RQ" BASE COUNT 356 a 489 c 480 g 263 t ORIGIN 1 cggtgcgttg caccgccgga ggctgggcag ctcgcagcgc tgctcggcgc tggaccccac 61 ccggcaggcg caggccaccc acacccggct ctgtgcggct gccccccgca gcattgcacg 121 gccgaccctc gcccgcccac tgccaccggc cgcgggactg gctgggactg gctcggccga 181 gggcactgct cctcggtgca ttgctgctcg ggcgccgcag cccgcagccg ccagcctccc 241 ccggccgtgc ccctcccccg tggagccggc tgtccgtcgg cgcccactgc ccggcggcag 301 cggcggagcc aggcagcccc gcggcggccg agcgcgctcg cgcatcgggc cctctggcct 361 tctttaccta gggcagcccg cgccccggtg cgagggagcg gtccttaccg agacccgccc 421 ggcccggcgg tgcgatgagc ttcttcggct tcgggcagag cgtggaggtg gaaatccttc 481 tgaacgatgc agagagtagg aagcgggccg agcacaagac ggaggacggg aagaaggaga 541 aatatttcct cttctacgac ggggagacgg tctccgggaa ggtgagcctt gccctcaaga 601 accccaacaa gcggctggag caccagggca tcaagatcga gttcatcggg cagatcgaac 661 tctactacga tcgcgggaac caccatgagt ttgtgtccct ggtgaaggac ctggcccggc 721 ctggagagat cacccagtcg caggccttcg actttgagtt tacccacgtg gagaagccgt 781 atgagtccta cacagggcag aatgtgaagc tacgctattt ccttcgtgct accatcagcc 841 gccgcctcaa tgatgttgtc aaagagatgg acattgtagt tcacacactc agcacatacc 901 cagagctgaa ctcttccatc aagatggagg ttgggattga ggactgtctg cacattgaat 961 ttgagtacaa taaatccaaa taccacttga aagatgtcat tgtagggaag atatacttcc 1021 tgctggtgag aatcaaaatc aagcacatgg agatagacat catcaagcga gaaacgacgg 1081 gtacaggccc caacgtgtac catgagaatg acacgatagc caagtacgag atcatggacg 1141 gggcaccagt gcgaggagag tccatcccga tccggctctt cctggccggg tatgagctca 1201 cgcccaccat gcgggacatc aacaagaagt tctctgtgcg ctattacctc aacctggtgc 1261 tgatagacga ggaggagcgg cgctacttca agcagcagga agtggtgttg tggcggaagg 1321 gtgacatcgt acggaagagc atgtcccacc aggcggccat cgcctcacag cgctttgagg 1381 gcaccacctc cctgggtgag gtgcggaccc ccagccagct gtctgacaac aactgcaggc 1441 agtaggcccc cagggccgag aagatgctgg gcacccaccc agcatcccca tctaccaaca 1501 ccagcggctg ggggcggggg cggaccttgt gaggctcagt tgacccgtta cttgcaacct 1561 gaaaacaaaa aaaaaaaaaa aaaaaaaa //