LOCUS BC009481 2545 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spermatogenesis associated 2, mRNA (cDNA clone
MGC:15312 IMAGE:3953522), complete cds.
ACCESSION BC009481
VERSION BC009481.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2545)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2545)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009481.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: j Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38176156.
FEATURES Location/Qualifiers
source 1..2545
/db_xref="H-InvDB:HIT000034396"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15312 IMAGE:3953522"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2545
/gene="SPATA2"
/gene_synonym="KIAA0757"
/gene_synonym="PD1"
/db_xref="GeneID:9825"
/db_xref="HGNC:HGNC:14681"
/db_xref="MIM:607662"
CDS 174..1736
/gene="SPATA2"
/gene_synonym="KIAA0757"
/gene_synonym="PD1"
/codon_start=1
/product="spermatogenesis associated 2"
/protein_id="AAH09481.1"
/db_xref="GeneID:9825"
/db_xref="HGNC:HGNC:14681"
/db_xref="MIM:607662"
/translation="MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRV
AASTLLSLHKVDPFYRFRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLY
PWKKEFRSIKTYTGPFVYYVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVK
MVSFELFLAKVECEQMLEIHSQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGR
EHLTASMSRVALQKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRK
EPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDD
VDLYTDSEPRATYRRQDALRPDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSS
SLCQRCDSLLTCPPASKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKS
KPSTTPTSRCGFCNRPGATNTCTQCSKVSCDACLSAYHYDPCYKKSELHKFMPNNQLN
YKSTQLSHLVYR"
BASE COUNT 537 a 809 c 647 g 552 t
ORIGIN
1 cccggctccg gcggcagccg cgcctctcgc ttgcttccct cggccgggcc gtcctcggcg
61 gcagtgtcag gagcactccg ctggtccagg cggcaacatg tccatgcttt tagtgatgtc
121 cctgcctcta atccagaagc catggaggag ataaggtagc ccccctcgat cggatgggga
181 agcccagttc aatggatact aaattcaagg atgacttatt tcggaagtac gtgcagttcc
241 atgagagcaa agtggatacc accaccagca ggcagcggcc tggcagcgat gagtgcctgc
301 gggtggcagc ctcaaccctg ctcagcctgc acaaggtgga tcccttttat cgattccggc
361 tgatccagtt ctatgaggtg gtggagagct ccttgcgctc gctcagctcc tctagcctgc
421 gggctctgca cggcgccttc agcatgctgg agacggtggg catcaacctc ttcctctacc
481 cgtggaagaa ggaattcaga agcatcaaga cctacacggg cccttttgtt tattatgtca
541 agtcgacatt actggaagag gacatccgag ccatcctgag ctgcatgggc tacacacctg
601 agctgggcac tgcatacaag ctcagagagc tcgtggagac cctccaggtg aagatggtct
661 cctttgagct ctttctggcc aaagtcgagt gtgagcagat gctagaaatc cactcacaag
721 tgaaggacaa gggctactcc gagctggaca ttgtgagcga gcgcaagagc agtgcagagg
781 atgtgcgcgg ctgctcggac gccctgcggc ggcgggcaga gggccgggag cacctgacgg
841 cctccatgtc acgagtggca ctccagaagt cggccagcga gcgggcggcc aaggactact
901 acaagccccg cgtgaccaag ccctcgaggt cagtggatgc ctatgacagc tactgggaga
961 gccggaagcc acccctgaag gcctcattga gtcttcggaa ggagcctgtg gcaacggatg
1021 tgggggacga cctcaaggat gagatcatcc gcccatcccc ttcgctgctg accatggcca
1081 gctcccccca cggcagcccg gatgtgcttc cacccgcctc ccccagcaac ggcccggccc
1141 tgctgcgcgg tacctacttc tccactcagg atgacgtgga tctgtacaca gactctgaac
1201 ccagggccac ctaccgtcgg caggatgctc tgcggccgga tgtgtggctg ctcagaaacg
1261 atgcccactc cctctaccac aagcgctcgc cccctgccaa agagtccgcc ctctccaagt
1321 gccaaagctg cgggctgtcc tgcagctcct ccctctgcca gcgctgtgac agcctgctca
1381 cctgtcctcc agcttccaag cccagcgcct tccccagcaa ggcctcgact catgacagcc
1441 tggcccacgg ggcatctctg cgggagaagt acccaggcca gactcagggc ctcgaccgcc
1501 tcccgcacct tcactccaaa tccaagccct ccaccacgcc cacttcccgc tgtggcttct
1561 gcaaccgccc aggcgccacc aacacctgca cccagtgttc aaaagtctca tgtgacgcct
1621 gcctcagcgc ttaccattat gacccctgct acaaaaagag tgagctgcac aagttcatgc
1681 ccaacaacca gctgaactac aagtccaccc agctctccca tctcgtgtac agatagaccg
1741 gcctcgcccc ttccagctcc aagggctaca tcaaccgacc tttcgggttt cacggtgaag
1801 aagtactaac gcattgatct cagaggcgga ggcctgcact tgaccatgta ggtggcagag
1861 atcgtgggct ggctgtgtcc acgtgggagt tcacttagcg actcagatat ctcaaccaat
1921 ggctgctttg ttgtctgaca agggagaagg tggcacttcc gttcagattc attttgctaa
1981 tctctccact ccctgttcag ttggttcttt ttttggggtt ttgttttgtt ttgttttgtt
2041 gttttgtttt ttcctttaaa gaggatttct gtctctggga ccctcgctgc acctacccct
2101 cccattgcaa agccaacttg gactgggaag ggcccttcag gtcaccaaac atccacctgg
2161 agcggcgagc tagaggcctg ttggcttgtg aaatgagccc tcctgccaca cggggcctct
2221 cccaaaggct catcccttgg ccgccccctt cctaaacaca aggatcccca gctggactcc
2281 ccaccccctg gcttccccac ctctccaggt gtcaaaggtg aaccgagtcc agtattagct
2341 gaatgtcatt tcgtacacca cagctcagtc agcccatggc cttcgtgaac tttgctccaa
2401 cacactgatg tgtgggcttc ccacagcagg actgacttcc ccctttctgt tgtttgcaca
2461 tgcccctctt actgtactgt caatagatat ttttgagatt tatttttaaa taaatattca
2521 acttgcaaaa aaaaaaaaaa aaaaa
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