LOCUS BC009326 2597 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens scavenger receptor class F, member 2, mRNA (cDNA clone
IMAGE:4125591), partial cds.
ACCESSION BC009326
VERSION BC009326.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2597)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2597)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC009326.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: g Column: 2.
FEATURES Location/Qualifiers
source 1..2597
/db_xref="H-InvDB:HIT000087256"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4125591"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2597
/gene="SCARF2"
/gene_synonym="SREC-II"
/gene_synonym="SREC2"
/gene_synonym="SRECRP-1"
/db_xref="GeneID:91179"
CDS <1..1789
/gene="SCARF2"
/gene_synonym="SREC-II"
/gene_synonym="SREC2"
/gene_synonym="SRECRP-1"
/codon_start=2
/product="SCARF2 protein"
/protein_id="AAH09326.2"
/db_xref="GeneID:91179"
/translation="PCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCD
QPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCA
FVCADCGSGHCDFQSGRCLCSPGVHGPHCNVTCPPGLHGADCAQACSCHEDTCDPVTG
ACHLETNQRKGVMGAGALLVLLVCLLLSLLGCCCACRGKDPTRRELSLGRKKAPHRLC
GRFSRISMKLPRIPLRRQKLPKVVVAHHDLDNTLNCSFLEPPSGLEQPSPSWSSRASF
SSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPAS
SDSERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKP
KVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTP
RPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTR
SLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETP
RKKTPIQKPPRKKSREAAGELGRAGAPTL"
BASE COUNT 403 a 976 c 840 g 378 t
ORIGIN
1 gccgtgcccc gccggcttct acggcttggg ctgtcgccgc cggtgtggcc agtgcaaggg
61 ccagcagccg tgcacggtgg ccgagggccg ctgcttgacg tgcgagcccg gctggaacgg
121 aaccaagtgc gaccagcctt gcgccaccgg tttctatggc gagggctgca gccaccgctg
181 tccgccatgc cgcgacgggc atgcctgtaa ccatgtcacc ggcaagtgta cgcgctgcaa
241 cgcgggctgg atcggcgacc ggtgcgagac caagtgtagc aatggcactt acggcgagga
301 ctgcgccttc gtgtgcgccg actgcggcag cggacactgc gacttccagt cggggcgctg
361 cctgtgcagc cctggcgtcc acgggcccca ctgtaacgtg acgtgcccgc ccggactcca
421 cggcgcggac tgtgctcagg cctgcagctg ccacgaggac acgtgcgacc cggtcactgg
481 tgcctgccac ctagaaacca accagcgcaa gggcgtgatg ggcgcgggcg cgctgctcgt
541 cctgctcgtc tgcctgctgc tctcgctgct cggctgctgc tgcgcttgcc gcggcaagga
601 ccctacgcgc cgggagcttt cgcttgggag gaagaaggcg ccgcaccgac tatgcgggcg
661 cttcagtcgc atcagcatga agctgccccg gatcccgctc cggaggcaga aactacccaa
721 agtcgtagtg gcccaccacg acctggataa cacactcaac tgcagcttcc tggagccacc
781 ctcagggctg gagcagccct caccatcctg gtcctctcgg gcctccttct cctcgtttga
841 caccactgat gaaggccctg tgtactgtgt accccatgag gaggcaccag cggagagccg
901 ggaccccgaa gtccccactg tccctgccga ggcgccggcg ccgtcccctg tgcccttgac
961 cacgccagcc tccgccgagg aggcgatacc cctccccgcg tcctccgaca gcgagcggtc
1021 ggcgtccagc gtggaggggc ccggaggggc tctgtacgcg cgcgtggccc gacgcgaggc
1081 ccggccggcc cgggcccggg gcgagattgg gggcctgtcg ctgtcgccat cgcccgagcg
1141 caggaaaccg ccgccacctg accccgccac caagcctaag gtgtcctgga tccacggcaa
1201 gcacagcgcc gctgcagctg gccgtgcgcc ctcaccaccg ccgccaggct ccgaggccgc
1261 gcccagcccc agcaagagga aacggacgcc cagcgacaaa tcggcgcata cggtcgaaca
1321 cggcagcccc cggacccgcg acccaacgcc gcggcccccc gggctgcccg aggaggcgac
1381 agccctcgct gcgccctcgc cgcccagggc ccgagcgcgg ggccgcggcc ccggcctctt
1441 ggagcccacg gacgccggcg gtcccccgcg aagcgcgccc gaggctgcct ccatgttggc
1501 cgctgagctg cgcggcaaga ctcgcagcct gggccgcgcc gaggtggccc tgggcgcgca
1561 gggccccagg gaaaagccgg cgcccccaca gaaagccaag cgctccgtgc cgccagcctc
1621 gcccgcccgc gcgcccccag cgaccgaaac cccggggcct gagaaggcgg cgaccgactt
1681 gcccgcgcct gagacccccc ggaagaagac ccccatccag aagccgccgc gcaagaagag
1741 ccgggaggcg gcgggcgagc tgggcagggc gggcgcaccc accctgtagc aggctgtggc
1801 tcgtccgcgc gcagctccct cagcttcgca gcgccgcccg ccaccccaca cctcccacgc
1861 taccgggcac gggcggcctc ctattggccg ggcaccgcgc ggctagcgga ggttgcgtct
1921 cattggctca ggtcctgcag ccgctcctgg attggagcag tgtgctctgg cgggaagggc
1981 ccatcccgtt ggtcgaggcc tgacaggcgc ttagcgggcg actccctccc cattggccga
2041 gttatggagc gctccgacca gacagcgtct cattggccaa agatgggagg gttccgctta
2101 aagaccgcct cttactggcc aggagtggac ttggttaggg ctaccttctc attggttgca
2161 gccagaggca cttctgcccg ggctgcctct cccccgctag ggcctggtgc ctctggctgg
2221 aggctccctc ccttggccgt cccaatagag cccggggcta cttccactgg ccaggctccc
2281 gggcatctgg ttgaccccag cctggggagg agggctggtc tccgctcctc aggggcttag
2341 tccgtcccac cccttccctt ccctggcgcc ccgggcccag gcccctcagc tgtcagctgg
2401 ttttgatggc ctcccactgc cccacacgcc gcgggacctc caggggcgac tctagtggcc
2461 tgaggagatg tatttatagg cccccagcag ggctgctccc ccctcggccg gtgccccagg
2521 atgggctcct cccggcgggg gcttggccaa agctttctta ataaaatgcc tttcccctca
2581 aaaaaaaaaa aaaaaaa
//