LOCUS BC009256 1538 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens family with sequence similarity 108, member A1, mRNA
(cDNA clone MGC:14860 IMAGE:3954724), complete cds.
ACCESSION BC009256
VERSION BC009256.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1538)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1538)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009256.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361948.
FEATURES Location/Qualifiers
source 1..1538
/db_xref="H-InvDB:HIT000034234"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14860 IMAGE:3954724"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1538
/gene="FAM108A1"
/gene_synonym="MGC5244"
/db_xref="GeneID:81926"
/db_xref="HGNC:HGNC:28756"
CDS 357..1289
/gene="FAM108A1"
/gene_synonym="MGC5244"
/codon_start=1
/product="FAM108A1 protein"
/protein_id="AAH09256.1"
/db_xref="GeneID:81926"
/db_xref="HGNC:HGNC:28756"
/translation="MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPG
PGGAGAAPLGTLRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCM
YVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSER
NLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGM
RVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEP
LWVEGAGHNDIELYSQYLERLRRFISQELPSQRA"
BASE COUNT 254 a 543 c 508 g 233 t
ORIGIN
1 ctgcggcggt ggcggtgcag gaggccgggc aggggtgcgg agggaccgac ggacgcacgg
61 gcgggcggcc gggagccatg gagcgcggcc ctggggcccg ggggcgcggg ccggggtggg
121 cttcccacgg cacgacatgg agacctgtgg ttgcgaggct ccctggggct cggcttggac
181 cgcgatgggg ctgggccctg gcctcctaac ggggctgctg tctggggcgg tagctggggg
241 ggcgctctcc cccctgcccg cgactcggag cacccccacc cctcccctgc cgggccaggc
301 cgggcggcgt tgttggcggg ggccccggtg gaggcccggc ctgggcggcg cccgccatga
361 atgggctgtc gctgagtgag ctctgctgcc tcttctgctg cccgccctgc cccggccgca
421 tcgctgccaa gctcgccttc ctgccgccgg aggccaccta ctccctggtg cctgagcccg
481 agccggggcc tggtggggcc ggggccgccc ccttggggac cctgagagcc tcctcgggcg
541 cacccgggcg ctggaagctg cacctgacgg agcgtgccga cttccagtac agccagcgcg
601 agctggacac catcgaggtc ttccccacca agagcgcccg cggcaaccgc gtctcctgca
661 tgtatgttcg ctgcgtgcct ggtgccaggt acacggtcct cttctcgcac ggcaatgccg
721 tggacctggg ccagatgagc agcttctaca ttggcctggg ctcccgcctc cactgcaaca
781 tcttctccta cgactactcc ggctacggtg ccagctcggg caggccttcc gagaggaacc
841 tctatgccga catcgacgcc gcctggcagg ccctgcgcac caggtacggc atcagcccgg
901 acagcatcat cctgtacggg cagagcatcg gcacggtgcc caccgtggac ctggcctcgc
961 gctacgagtg tgccgcggtg gtgctgcact cgccgctcac ctcgggcatg cgcgtcgcct
1021 tccccgacac caagaagacc tactgcttcg acgccttccc taacatcgag aaggtgtcca
1081 agatcacgtc tcccgtgctc atcatccacg gcacggagga cgaggtgatc gacttctcgc
1141 acgggctggc gctctacgag cgctgcccca aggcggtgga gccgctgtgg gtggagggcg
1201 ccgggcacaa cgacatcgag ctctacagcc agtacctgga gcgcctgcgt cgcttcatct
1261 cccaggagct gcccagccag cgcgcctagc ggcggcccca accggccgga cctcagcaat
1321 aaggcggccc ccggacctca ccccgcgccg gcccccaccc aggggctgca tgtggacccc
1381 ccgggcggcc caggggaccc cgccccgacc caggggctgt ggacgatgta caggcaacag
1441 agctacgcac tcctttcctt ttggaagcaa gaagaaaata cgtgaaaacg gaaattaaag
1501 atttaaaatt ttaaaaaaaa aaaaaaaaaa aaaaaaaa
//