LOCUS BC008907 919 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens heat shock 70kDa protein 8, mRNA (cDNA clone
IMAGE:3836086), partial cds.
ACCESSION BC008907
VERSION BC008907.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 919)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC008907.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: l Column: 18.
FEATURES Location/Qualifiers
source 1..919
/db_xref="H-InvDB:HIT000087169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3836086"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..919
/gene="HSPA8"
/gene_synonym="HSC54"
/gene_synonym="HSC70"
/gene_synonym="HSC71"
/gene_synonym="HSP71"
/gene_synonym="HSP73"
/gene_synonym="LAP1"
/gene_synonym="MGC29929"
/gene_synonym="NIP71"
/db_xref="GeneID:3312"
/db_xref="HGNC:HGNC:5241"
/db_xref="MIM:600816"
CDS <1..661
/gene="HSPA8"
/gene_synonym="HSC54"
/gene_synonym="HSC70"
/gene_synonym="HSC71"
/gene_synonym="HSP71"
/gene_synonym="HSP73"
/gene_synonym="LAP1"
/gene_synonym="MGC29929"
/gene_synonym="NIP71"
/codon_start=2
/product="HSPA8 protein"
/protein_id="AAH08907.2"
/db_xref="GeneID:3312"
/db_xref="HGNC:HGNC:5241"
/db_xref="MIM:600816"
/translation="FTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGV
PQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAED
EKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTA
EKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEV
D"
BASE COUNT 315 a 172 c 214 g 218 t
ORIGIN
1 cttcactacc tattctgaca accagcctgg tgtgcttatt caggtttatg aaggcgagcg
61 tgccatgaca aaggataaca acctgcttgg caagtttgaa ctcacaggca tacctcctgc
121 accccgaggt gttcctcaga ttgaagtcac ttttgacatt gatgccaatg gtatactcaa
181 tgtctctgct gtggacaaga gtacgggaaa agagaacaag attactatca ctaatgacaa
241 gggccgtttg agcaaggaag acattgaacg tatggtccag gaagctgaga agtacaaagc
301 tgaagatgag aagcagaggg acaaggtgtc atccaagaat tcacttgagt cctatgcctt
361 caacatgaaa gcaactgttg aagatgagaa acttcaaggc aagattaacg atgaggacaa
421 acagaagatt ctggacaagt gtaatgaaat tatcaactgg cttgataaga atcagactgc
481 tgagaaggaa gaatttgaac atcaacagaa agagctggag aaagtttgca accccatcat
541 caccaagctg taccagagtg caggaggcat gccaggagga atgcctgggg gatttcctgg
601 tggtggagct cctccctctg gtggtgcgtc ctcagggccc accattgaag aggttgatta
661 agccaaccaa gtgtagatgt agcattgttc cacacattta aaacatttga aggacctaaa
721 ttcgtagcaa attctgtggc agttttaaaa agttaagctg ctatagtaag ttactgggca
781 ttctcaatac ttgaatatgg aacatatgca caggggaagg aaataacatt gcactttata
841 aacactgtat tgtaagtgga aaatgcaatg tcttaaataa aactatttaa aattggcacc
901 aaaaaaaaaa aaaaaaaaa
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