LOCUS       BC008611                1436 bp    mRNA    linear   HUM 07-OCT-2003
DEFINITION  Homo sapiens major histocompatibility complex, class I, A, mRNA
            (cDNA clone MGC:17191 IMAGE:4157200), complete cds.
ACCESSION   BC008611
VERSION     BC008611.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 12 Row: e Column: 21
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
FEATURES             Location/Qualifiers
     source          1..1436
                     /db_xref="H-InvDB:HIT000033861"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:17191 IMAGE:4157200"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1436
                     /gene="HLA-A"
                     /db_xref="GeneID:3105"
                     /db_xref="MIM:142800"
     CDS             6..1103
                     /gene="HLA-A"
                     /codon_start=1
                     /product="HLA-A protein"
                     /protein_id="AAH08611.1"
                     /db_xref="GeneID:3105"
                     /db_xref="MIM:142800"
                     /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEP
                     RFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRESL
                     RIALRYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAA
                     DMAAQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAV
                     SDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSG
                     QEQRYTCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRR
                     KSSDRKGGSYSQAASSDSAQGSDMSLTACKV"
     misc_feature    78..614
                     /gene="HLA-A"
                     /note="MHC_I; Region: Class I Histocompatibility antigen,
                     domains alpha 1 and 2"
                     /db_xref="CDD:pfam00129"
     misc_feature    669..884
                     /gene="HLA-A"
                     /note="IGc1; Region: Immunoglobulin C-Type"
                     /db_xref="CDD:smart00407"
BASE COUNT          295 a          420 c          447 g          274 t
ORIGIN      
        1 cgaggatggc cgtcatggcg ccccgaaccc tcgtcctgct actctcgggg gccctggccc
       61 tgacccagac ctgggcgggc tcccactcca tgaggtattt ctacacctcc gtgtcccggc
      121 ccggccgcgg ggagccccgc ttcatcgccg tgggctacgt ggacgacacg cagttcgtgc
      181 ggttcgacag cgacgccgcg agccagagga tggagccgcg ggcgccgtgg atagagcagg
      241 aggggccgga gtattgggac cggaacacac ggaatgtgaa ggcccactca cagactgacc
      301 gagagagcct gcggatcgcg ctccgctact acaaccagag cgaggacggt tctcacacca
      361 tccagaggat gtatggctgc gacgtggggc cggacgggcg cttcctccgc gggtaccagc
      421 aggacgctta cgacggcaag gattacatcg ccctgaacga ggacctgcgc tcttggaccg
      481 cggcggacat ggcggctcag atcacccagc gcaagtggga gacggcccat gaggcggagc
      541 agtggagagc ctacctggag ggccggtgcg tggagtggct ccgcagatac ctggagaacg
      601 ggaaggagac gctgcagcgc acggacgccc ccaagacgca tatgactcac cacgctgtct
      661 ctgaccatga ggccaccctg aggtgctggg ccctgagctt ctaccctgcg gagatcacac
      721 tgacctggca gcgggatggg gaggaccaga cccaggacac ggagctcgtg gagaccaggc
      781 ctgcagggga tgggaccttc cagaagtggg cgtctgtggt ggtgccttct ggacaggagc
      841 agagatacac ctgccatgtg cagcatgagg gtctgcccaa gcccctcacc ctgagatggg
      901 agccgtcttc ccagcccacc atccccatcg tgggcatcat tgctggcctg gttctctttg
      961 gagctgtgat cgctggagct gtggtcgctg ctgtgatgtg gaggaggaag agctcagata
     1021 gaaaaggagg gagctactct caggctgcaa gcagtgacag tgcccagggc tctgatatgt
     1081 ctctcacagc ttgtaaagtg tgagacagct gccttgtgtg ggactgagag gcaagatttg
     1141 ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa aggcacctgc
     1201 atgtgtctgt gttcttgtag gcataatgtg aggaggtggg gagaccaccc cacccccatg
     1261 tccaccatga ccctcttccc acgctgacct gtgctccctc cccaatcatc tttcctgttc
     1321 cagagaggtg gggctgaggt gtctccatct ctgcctcaac ttcatggtgc actgagctgt
     1381 aactttttcc ttccctatta aaattagaac ctgagtataa aaaaaaaaaa aaaaaa
//