LOCUS BC008425 1159 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens tropomyosin 3, mRNA (cDNA clone MGC:14582
IMAGE:4246114), complete cds.
ACCESSION BC008425
VERSION BC008425.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1159)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1159)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: i Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748618.
FEATURES Location/Qualifiers
source 1..1159
/db_xref="H-InvDB:HIT000033784"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14582 IMAGE:4246114"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1159
/gene="TPM3"
/gene_synonym="hscp30"
/gene_synonym="MGC14582"
/gene_synonym="MGC3261"
/gene_synonym="OK/SW-cl.5"
/gene_synonym="TM-5"
/gene_synonym="TM3"
/gene_synonym="TM30"
/gene_synonym="TM30nm"
/gene_synonym="TPMsk3"
/gene_synonym="TRK"
/db_xref="GeneID:7170"
/db_xref="HGNC:HGNC:12012"
/db_xref="MIM:191030"
CDS 87..944
/gene="TPM3"
/gene_synonym="hscp30"
/gene_synonym="MGC14582"
/gene_synonym="MGC3261"
/gene_synonym="OK/SW-cl.5"
/gene_synonym="TM-5"
/gene_synonym="TM3"
/gene_synonym="TM30"
/gene_synonym="TM30nm"
/gene_synonym="TPMsk3"
/gene_synonym="TRK"
/codon_start=1
/product="tropomyosin 3"
/protein_id="AAH08425.1"
/db_xref="GeneID:7170"
/db_xref="HGNC:HGNC:12012"
/db_xref="MIM:191030"
/translation="MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDEL
AAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDR
AQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEAD
RKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQK
EDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD
HALNDMTSI"
BASE COUNT 374 a 244 c 320 g 221 t
ORIGIN
1 ggtcactcag gcagcagccc cttctttctt gccccagtct ccagttctcc agtgttcaca
61 ggtgagccta ccaacagcca ctgctcatga tggaggccat caagaaaaag atgcagatgc
121 tgaagttaga caaggagaat gctctggatc gggcagagca agctgaagct gagcagaagc
181 aggcagaaga aagaagtaaa cagctggagg atgagctggc agccatgcag aagaagctga
241 aagggacaga ggatgagctg gacaagtatt ctgaagcttt gaaggatgcc caggagaagc
301 tggaactggc agagaagaag gctgctgatg ctgaggctga ggtggcctcc ttgaaccgta
361 ggatccagct ggttgaagaa gagctggacc gtgctcagga gcgcctggcc actgccctgc
421 aaaagctgga agaagctgaa aaagctgctg atgagagtga gagaggtatg aaggttattg
481 aaaaccgggc cttaaaagat gaagaaaaga tggaactcca ggaaatccaa ctcaaagaag
541 ctaagcacat tgcagaagag gcagatagga agtatgaaga ggtggctcgt aagttggtga
601 tcattgaagg agacttggaa cgcacagagg aacgagctga gctggcagag tctaagtgtt
661 ctgagctgga ggaggagctg aagaatgtca ccaacaacct caagtctctt gaggctcagg
721 cggagaagta ctctcaaaaa gaagataaat atgaggaaga aatcaagatt cttactgata
781 aactcaagga ggcagagacc cgtgctgagt ttgctgagag atcggtagcc aagctggaaa
841 agacaattga tgacctggaa gatgagctct atgcccagaa actgaagtac aaggccatta
901 gcgaggagct ggaccacgcc ctcaatgaca tgacctctat ataattatca ccgtttctgc
961 tctgttctgg atctgccccc tttactcctc ggggaaccca aggccccact ctcgctctgg
1021 attccatttg ggtcagcctg gctggtcccc aaggcattag gatgggggag caaaaagcaa
1081 cttatgtatt ttcttccacc cccaccccaa attaaaatgt taagctgcca aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaa
//