LOCUS BC008378 1227 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens programmed cell death 2, mRNA (cDNA clone MGC:12347
IMAGE:4102043), complete cds.
ACCESSION BC008378
VERSION BC008378.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1227)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21735591.
FEATURES Location/Qualifiers
source 1..1227
/db_xref="H-InvDB:HIT000033754"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12347 IMAGE:4102043"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1227
/gene="PDCD2"
/gene_synonym="MGC12347"
/gene_synonym="RP8"
/gene_synonym="ZMYND7"
/db_xref="GeneID:5134"
/db_xref="HGNC:HGNC:8762"
/db_xref="MIM:600866"
CDS 74..1108
/gene="PDCD2"
/gene_synonym="MGC12347"
/gene_synonym="RP8"
/gene_synonym="ZMYND7"
/codon_start=1
/product="programmed cell death 2"
/protein_id="AAH08378.1"
/db_xref="GeneID:5134"
/db_xref="HGNC:HGNC:8762"
/db_xref="MIM:600866"
/translation="MAAAGARPVELGFAESAPAWRLRSEQFPSKVGGRPAWLGAAGLP
GPQALACELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPCCAGLRVFRNQLPR
KNDFYSYEPPSENPPPETGESVCLQLKSGAHLCRVCGCLGPKTCSRCHKAYYCSKEHQ
TLDWRLGHKQACAQPDHLDHIIPDHNFLFPEFEIVIETEDEIMPEVVEKEDYSEIIGS
MGEALEEELDSMAKHESREDKIFQKFKTQIALEPEQILRYGRGIAPIWISGENIPQEK
DIPDCPCGAKRILEFQVMPQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEF
VWKQDVTDTP"
BASE COUNT 317 a 317 c 318 g 275 t
ORIGIN
1 cttccggccc ggcgcccgat ttccgccttc cgacccagct gtgggctgcg ccccacgcca
61 gcccgcgccc cgcatggctg ccgccggggc caggcctgtg gagctgggct tcgccgagtc
121 ggcgccggcg tggcgactgc gcagcgagca gttccccagc aaggtgggcg ggcggccggc
181 atggctgggc gcggccgggc tgccggggcc ccaggccctg gcctgcgagc tgtgcggccg
241 cccgctctcc ttcctgctgc aggtgtatgc gccgctgcct ggccgcccgg acgccttcca
301 ccgctgcatc ttcctcttct gctgccgcga gcagccgtgc tgtgccggcc tgcgagtttt
361 taggaatcaa ctacccagga aaaacgattt ttactcatat gagccacctt ctgagaatcc
421 tcccccagaa acaggagaat cagtgtgtct ccagcttaag tctggtgctc atctctgcag
481 ggtttgtggc tgtttaggcc ccaaaacgtg ctccagatgc cacaaagcat attactgcag
541 caaggagcat cagaccctag actggagatt gggacataag caggcttgtg cacaaccaga
601 tcatctggac catataattc cagaccacaa cttccttttt ccagaatttg aaattgtaat
661 agaaacagaa gatgagatta tgcctgaggt tgtggaaaag gaagattact cagagattat
721 agggagcatg ggtgaagcac ttgaggaaga actggattcc atggcaaaac atgaatccag
781 ggaagataaa atttttcaga agtttaaaac tcagatagcc cttgaaccag aacagattct
841 tagatatggc agaggtattg cccccatctg gatttctggt gaaaatattc ctcaagaaaa
901 ggatattcca gattgcccct gtggtgccaa gagaatattg gaattccagg tcatgcctca
961 gctcctaaac tacctgaagg ctgacagact gggcaagagc attgactggg gcatcctggc
1021 tgtcttcacc tgtgctgaga gctgcagctt gggtactggc tatacagaag aatttgtgtg
1081 gaagcaggat gtaacagata caccgtaaag gcatcttaaa gccttgaaaa atgttaataa
1141 tcttttatac cttgcaattc catttctggg attttatcct aaggaaatac ttataccaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//