LOCUS BC007986 1051 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens thymidine kinase 1, soluble, mRNA (cDNA clone MGC:3644 IMAGE:2966331), complete cds. ACCESSION BC007986 VERSION BC007986.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1051) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1051) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 31, 2003 this sequence version replaced BC007986.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: k Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507518 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..1051 /db_xref="H-InvDB:HIT000033572" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3644 IMAGE:2966331" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1051 /gene="TK1" /gene_synonym="TK2" /db_xref="GeneID:7083" /db_xref="HGNC:HGNC:11830" /db_xref="MIM:188300" CDS 37..741 /gene="TK1" /gene_synonym="TK2" /codon_start=1 /product="TK1 protein" /protein_id="AAH07986.1" /db_xref="GeneID:7083" /db_xref="HGNC:HGNC:11830" /db_xref="MIM:188300" /translation="MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQ IAQYKCLVIKYAKDTRYSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFF PDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREA AYTKRLGTEKEVEVIGGADKYHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAA RKLFAPQQILQCSPAN" BASE COUNT 238 a 298 c 310 g 205 t ORIGIN 1 gagagtactc gggttcgtga acttcccgga ggcgcaatga gctgcattaa cctgcccact 61 gtgctgcctg gctcccccag caagacccgg gggcagatcc aggtgattct cgggccgatg 121 ttctcaggaa aaagcacaga gttgatgaga cgcgtccgtc gcttccagat tgctcagtac 181 aagtgcctgg tgatcaagta tgccaaagac actcgctaca gcagcagctt ctgcacacat 241 gaccggaaca ccatggaggc actgcccgcc tgcctgctcc gagacgtggc ccaggaggcc 301 ctgggcgtgg ctgtcatagg catcgacgag gggcagtttt tccctgacat cgtggagttc 361 tgcgaggcca tggccaacgc cgggaagacc gtaattgtgg ctgcactgga tgggaccttc 421 cagaggaagc catttggggc catcctgaac ctggtgccgc tggccgagag cgtggtgaag 481 ctgacggcgg tgtgcatgga gtgcttccgg gaagccgcct ataccaagag gctcggcaca 541 gagaaggagg tcgaggtgat tgggggagca gacaagtacc actccgtgtg tcggctctgc 601 tacttcaaga aggcctcagg ccagcctgcc gggccggaca acaaagagaa ctgcccagtg 661 ccaggaaagc caggggaagc cgtggctgcc aggaagctct ttgccccaca gcagattctg 721 caatgcagcc ctgccaactg agggacctgc gagggccgcc cgctcccttc ctgccactgc 781 cgcctactgg acgctgccct gcatgctgcc ctgaggatgg cctggattca cgccctcttg 841 tttccttttg ggctcaaagc ccttcctacc tctggtgatg gtttccacag gaacaacagc 901 atctttcacc aagatgggtg gcaccaacct tgctgggact tggatcccag gggcttatct 961 cttcaagtgt ggagagggca gggtccacgc ctctgctgta gcttatgaaa ttaactaatt 1021 gaaaattcaa aaaaaaaaaa aaaaaaaaaa a //