LOCUS BC007845 1770 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens lysosomal-associated membrane protein 1, mRNA (cDNA clone IMAGE:4128923), partial cds. ACCESSION BC007845 VERSION BC007845.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1770) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1770) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC007845.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: g Column: 18. FEATURES Location/Qualifiers source 1..1770 /db_xref="H-InvDB:HIT000086933" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4128923" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1770 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /db_xref="GeneID:3916" /db_xref="MIM:153330" CDS <1..747 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /codon_start=1 /product="LAMP1 protein" /protein_id="AAH07845.2" /db_xref="GeneID:3916" /db_xref="MIM:153330" /translation="LHDATIQAYLSNSSFSRGETRCEQDRPSPTTAPPAPPSPSPSPV PKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTVTRLLNINPNKTSASGSCGA HLVTLELHSEGTTVLLFQFGMNASSSRFFLQGIQLNTILPDARDPAFKAANGSLRALQ ATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGSVEECLLDENSMLIPIA VGGALAGLVLIVLIAYLVGRKRSHAGYQTI" misc_feature 1..744 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /note="Lamp; Region: Lysosome-associated membrane glycoprotein (Lamp)" /db_xref="CDD:pfam01299" BASE COUNT 376 a 446 c 511 g 437 t ORIGIN 1 ctccatgatg ccaccatcca ggcgtacctt tccaacagca gcttcagcag gggagagaca 61 cgctgtgaac aagacaggcc ttccccaacc acagcgcccc ctgcgccacc cagcccctcg 121 ccctcacccg tgcccaagag cccctctgtg gacaagtaca acgtgagcgg caccaacggg 181 acctgcctgc tggccagcat ggggctgcag ctgaacctca cctatgagag gaaggacaac 241 acgacggtga caaggcttct caacatcaac cccaacaaga cctcggccag cgggagctgc 301 ggcgcccacc tggtgactct ggagctgcac agcgagggca ccaccgtcct gctcttccag 361 ttcgggatga atgcaagttc tagccggttt ttcctacaag gaatccagtt gaatacaatt 421 cttcctgacg ccagagaccc tgcctttaaa gctgccaacg gctccctgcg agcgctgcag 481 gccacagtcg gcaattccta caagtgcaac gcggaggagc acgtccgtgt cacgaaggcg 541 ttttcagtca atatattcaa agtgtgggtc caggctttca aggtggaagg tggccagttt 601 ggctctgtgg aggagtgtct gctggacgag aacagcatgc tgatccccat cgctgtgggt 661 ggtgccctgg cggggctggt cctcatcgtc ctcatcgcct acctcgtcgg caggaagagg 721 agtcacgcag gctaccagac tatctagcct ggtgcacgca ggcacagcag ctgcaggggc 781 ctctgttcct ttctctgggc ttagggtcct gtcgaagggg aggcacactt tctggcaaac 841 gtttctcaaa tctgcttcat ccaatgtgaa gttcatcttg cagcatttac tatgcacaac 901 agagtaacta tcgaaatgac ggtgttaatt ttgctaactg ggttaaatat tttgctaact 961 ggttaaacat taatatttac caaagtagga ttttgagggt gggggtgctc tctctgaggg 1021 ggtgggggtg ccgctgtctc tgaggggtgg gggtgccgct gtctctgagg ggtgggggtg 1081 ccgctctctc tgagggggtg ggggtgccgc tttctctgag ggggtggggg tgccgctctc 1141 tctgaggggg tgggggtgct gctctctccg aggggtggaa tgccgctgtc tctgaggggt 1201 gggggtgccg ctctaaattg gctccatatc atttgagttt agggttctgg tgtttggttt 1261 cttcattctt tactgcactc agatttaagc cttacaaagg gaagcctctg gccgtcacac 1321 gtaggacgca tgaaggtcac tcgtggtgag gctgacatgc tcacacatta caacagtaga 1381 gagggaaaat cctaagacag aggaactcca gagatgagtg tctggagcgc ttcagttcag 1441 ctttaaaggc caggacgggc cacacgtggc tggcggcctc gttccagtgg cggcacgtcc 1501 ttgggcgtct ctaatgtctg cagctcaagg gctggcactt ttttaaatat aaaaatgggt 1561 gttattttta tttttttttg taaagtgatt tttggtcttc tgttgacatt cggggtgatc 1621 ctgttctgcg ctgtgtacaa tgtgagatcg gtgcgttctc ctgatgtttt gccgtggctt 1681 ggggattgta cacgggacca gctcacgtaa tgcattgcct gtaacaatgt aataaaaagc 1741 ctctttcttt ttaaaaaaaa aaaaaaaaaa //