LOCUS BC007644 1193 bp mRNA linear HUM 30-MAR-2005
DEFINITION Homo sapiens Yip1 interacting factor homolog B (S. cerevisiae),
mRNA (cDNA clone IMAGE:3534558), partial cds.
ACCESSION BC007644
VERSION BC007644.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1193)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308363.
FEATURES Location/Qualifiers
source 1..1193
/db_xref="H-InvDB:HIT000086875"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3534558"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1193
/gene="YIF1B"
/db_xref="GeneID:90522"
CDS <1..933
/gene="YIF1B"
/codon_start=1
/product="YIF1B protein"
/protein_id="AAH07644.1"
/db_xref="GeneID:90522"
/translation="HPAGLAAAAAGTPRLPSKRRIPVSQPGMADPHQLFDDTSSAQSR
GYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQGKELVDKNIDRFIPI
TKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFDVNAPDLYIPAMAF
ITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLVTVNTDLTTIDL
VAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKILADAAAEGV
PVRGARNQLRMYLTMAVAAAQPMLMYWLTFHLVR"
BASE COUNT 216 a 400 c 349 g 228 t
ORIGIN
1 cacccggcag gcttggcggc ggcggctgcg gggacgcccc ggctgccctc gaagcggagg
61 atccctgtgt cccagccggg catggccgac ccccaccagc ttttcgatga cacaagttca
121 gcccagagcc ggggctatgg ggcccagcgg gcacctggtg gcctaagtta tcctgcagcc
181 tctcccacgc cccatgcagc cttcctggct gacccggtgt ccaacatggc catggcctat
241 gggagcagcc tggccgcgca gggcaaggag ctggtggata agaacatcga ccgcttcatc
301 cccatcacca agctcaagta ttactttgct gtggacacca tgtatgtggg cagaaagctg
361 ggcctgctgt tcttccccta cctacaccag gactgggaag tgcagtacca acaggacacc
421 ccggtggccc cccgctttga cgtcaatgcc ccggacctct acattccagc aatggctttc
481 atcacctacg ttttggtggc tggtcttgcg ctggggaccc aggataggtt ctccccagac
541 ctcctggggc tgcaagcgag ctcagccctg gcctggctga ccctggaggt gctggccatc
601 ctgctcagcc tctatctggt cactgtcaac accgacctca ccaccatcga cctggtggcc
661 ttcttgggct acaaatatgt cgggatgatt ggcggggtcc tcatgggcct gctcttcggg
721 aagattggct actacctggt gctgggctgg tgctgcgtgg ccatctttgt gttcatgatc
781 cggacgctgc ggctgaagat cttggcagac gcagcagctg agggggtccc ggtgcgtggg
841 gcccggaacc agctgcgcat gtacctgacc atggcggtgg cggcggcgca gcctatgctc
901 atgtactggc tcaccttcca cctggtgcgg tgagcgcgcc cgctgaacct cccgctgctg
961 ctgctgctgc tgggggccac tgtggccgcc gaactcatct cctgcctgca ggccccaagg
1021 tccaccctgt ctggccacag gcaccgcctc catcccatgt cccgcccagc cccgccccca
1081 acccaaggtg ctgagagatc tccagctgca caggccaccg ccccagggcg tggccgctgt
1141 tacagaaaca ataaaccctg atgggcatgg cgaaaaaaaa aaaaaaaaaa aaa
//