LOCUS BC006478 1779 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calbindin 1, 28kDa, mRNA (cDNA clone MGC:4352 IMAGE:2822391), complete cds. ACCESSION BC006478 VERSION BC006478.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1779) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1779) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: p Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5579451. FEATURES Location/Qualifiers source 1..1779 /db_xref="H-InvDB:HIT000032862" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4352 IMAGE:2822391" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1779 /gene="CALB1" /db_xref="GeneID:793" /db_xref="HGNC:HGNC:1434" /db_xref="MIM:114050" CDS 173..958 /gene="CALB1" /codon_start=1 /product="calbindin 1, 28kDa" /protein_id="AAH06478.1" /db_xref="GeneID:793" /db_xref="HGNC:HGNC:1434" /db_xref="MIM:114050" /translation="MAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELQ QARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEE FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDG KLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDL CEKNKQDLDINNITTYKKNIMALSDGGKLYRTDLALILCAGDN" BASE COUNT 578 a 353 c 357 g 491 t ORIGIN 1 ctctggagga acgctgagct gagcagcacc gaggacagcg cccggcagcg cccgcgccca 61 ggtctccctc cgcagccctg actcgcgcac acgctgagct tttgctcact ccccttcgcg 121 cggacacaga cacacgcata ttcacacacc cagacacaca ccccgctgta caatggcaga 181 atcccacctg cagtcatccc tcatcacagc ctcacagttt ttcgagatct ggctccattt 241 cgacgctgac ggaagtggtt acctggaagg aaaggagctg cagaacttga tccaggagct 301 ccagcaggcg cgaaagaagg ctggattgga gttatcacct gaaatgaaaa cttttgtgga 361 tcagtatggg caaagagatg atggaaaaat aggaattgta gagttggctc acgtattacc 421 cacagaagag aatttcctgc tgctcttccg atgccagcag ctgaagtcct gtgaggaatt 481 catgaagaca tggagaaaat atgatactga ccacagtggc ttcatagaaa ctgaggagct 541 taagaacttt ctaaaggacc tgctagaaaa agcaaacaag actgttgatg acacaaaatt 601 agccgagtat acagacctaa tgctgaaact atttgattca aataatgatg ggaagctgga 661 attaactgag atggccaggt tactaccagt gcaggagaat tttcttctta aattccaggg 721 aatcaaaatg tgtgggaaag agttcaataa ggcttttgag ctgtatgatc aggacggcaa 781 tggatacata gatgaaaatg aactggatgc tttactgaag gatctgtgcg agaagaataa 841 acaggatctg gatattaata atattacaac atacaagaag aacataatgg ctttgtcgga 901 tggagggaag ctgtaccgaa cggatcttgc tcttattctc tgtgctgggg ataactagag 961 ttggtggccg caaccacttg ctagtgatac actgtatcta aaaaataact gtgcactata 1021 agggagtagg ctgtattttc ttttatatct gtaaatttaa ctgcatatag ataattatcc 1081 aggatgtgtg gctcattctt ttcagcttgt ttctatactg tttgtaatat acagtttttg 1141 taaccatatg attgaaaaga agaaagtcta tgcttaggcc agtcagtaca cccaatttta 1201 aaaaataaca tattcttgct ttcacaaata tagttgaaca agatttccct aaaaattcca 1261 ccaggattaa tctctaaaat tctagtctct gatttgcaaa tgcacatttg tcactgaata 1321 atggaattat gtataacaag ccaaacattc ttattttaga caaccataga actgtcccac 1381 aaaatatttc taagcttatt tctaactatt aggaggaatg tgcttttcca tctaaaatac 1441 tcaccaaaat atagttaatt gtggctttat gaagttaaca gtctcattac agatttagtt 1501 taccaatcaa cagcatgtct actgcttgga tccatacaaa actatcggtt caagttgatg 1561 tgacaaggga agggagcacc agatgacaca taaatctgtc tgattctatg cctgtatttc 1621 caacaaactt actgtcagag aatatgacct aaatccattt tctaaactgt tttcatgtgt 1681 tgcaaattat tctagtcaac tgctgtttta tgtcatactc tgtgtaatct ctgattaaat 1741 ttaatatact gcaaaaaaaa aaaaaaaaaa aaaaaaaaa //