LOCUS BC006432 1653 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens caveolin 1, caveolae protein, 22kDa, mRNA (cDNA clone
IMAGE:3689500), with apparent retained intron.
ACCESSION BC006432
VERSION BC006432.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1653)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1653
/db_xref="H-InvDB:HIT000032830"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3689500"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 386 a 430 c 429 g 408 t
ORIGIN
1 taaagcacag cccagggaaa cctcctcaca gttttcatcc agccacgggc cagcacgtct
61 gggggcaaat acgtagactc ggaggtaggc atccgtgggg gggcgccggc tcgggcgtgc
121 ggggagtgtc cgcttctgct atctgcctct ccaaatatcc cgactgctgc cctggcccca
181 gccctctctc cacttcggag cactcctctg gcgttggcac cgctgaggaa tgggcctggg
241 cggggaggtg aagagaagcc aggaatgttt tatgttttcc taatggagag ggggcctcgg
301 gagcccctga gctaggagga cacggaaaag gggattgggg tcctgagatt gggtctgttg
361 ggcccaggac gcgttttctg gatgggtcta ggatgctccc ctgtcgcggg acccccgcgg
421 tccggccctg cctgctgggg gttcgaagag gtggagtgca gggtggaggt gttatttacc
481 cgagtcctgg ggacagtccc cgggactctc cgccaggcgc ccagaccggc aggtcccgca
541 ggcggcgcgc ggtgtgtttg cactttccaa agttcttgaa ccatctcaag aactccttct
601 gcatcttggc gtctggcagg ggtgttccga gagaggtaga cctcccctcc ccaaactgcc
661 accatcactt ccaacgccct ccacgcgctg gagctctgcc cgggtgtgga aacctcgtct
721 tccaacacgt agctgccctt cagccacccg cccgcagcct gggagtgccc tgagggtggg
781 tcgggggagc tgcgcaggga catctctaca ccgttcccat ccgggaacag ggcaacatct
841 acaagcccaa caacaaggcc atggcagacg agctgagcga gaagcaagtg tacgacgcgc
901 acaccaagga gatcgacctg gtcaaccgcg accctaaaca cctcaacgat gacgtggtca
961 agattgactt tgaagatgtg attgcagaac cagaagggac acacagtttt gacggcattt
1021 ggaaggccag cttcaccacc ttcactgtga cgaaatactg gttttaccgc ttgctgtctg
1081 ccctctttgg catcccgatg gcactcatct ggggcattta cttcgccatt ctctctttcc
1141 tgcacatctg ggcagttgta ccatgcatta agagcttcct gattgagatt cagtgcatca
1201 gccgtgtcta ttccatctac gtccacaccg tctgtgaccc actctttgaa gctgttggga
1261 aaatattcag caatgtccgc atcaacttgc agaaagaaat ataaatgaca tttcaaggat
1321 agaagtatac ctgatttttt ttccttttaa ttttcctggt gccaatttca agttccaagt
1381 tgctaataca gcaacaattt atgaattgaa ttatcttggt tgaaaataaa aagatcactt
1441 tctcagtttt cataagtatt atgtctcttc tgagctattt catctatttt tggcagtctg
1501 aatttttaaa acccatttaa atttttttcc ttaccttttt atttgcatgt ggatcaacca
1561 tcgctttatt ggctgagata tgaacatatt gttgaaaggt aatttgagag aaatatgaag
1621 aactgaggag gaaaaaaaaa aaaaaaaaaa aaa
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