LOCUS       BC006303                2209 bp    mRNA    linear   HUM 30-SEP-2003
DEFINITION  Homo sapiens Fanconi anemia, complementation group C, mRNA (cDNA
            clone IMAGE:4100953), partial cds.
ACCESSION   BC006303
VERSION     BC006303.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 17 Row: c Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
            
            Differences found between this sequence and the human reference
            genome (build 36) are described in misc_difference features below
            and these differences were also compared to chimpanzee genome
            (build 2).
FEATURES             Location/Qualifiers
     source          1..2209
                     /db_xref="H-InvDB:HIT000086633"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4100953"
                     /tissue_type="Brain, neuroblastoma"
                     /clone_lib="NIH_MGC_19"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     misc_difference 1..6
                     /note="6 bases at the 5' end do not align to the human
                     genome."
     misc_difference 63
                     /note="'G' in cDNA is 'A' in the human genome."
     misc_difference 610
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 645
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 649
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 670
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 684
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 686
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 733
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 859
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 886
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 888
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 2069
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 2071
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 2098
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 2112
                     /note="'G' in cDNA is 'A' in the human genome.  The
                     chimpanzee genome agrees with the human genomic sequence
                     and not the cDNA."
     misc_difference 2209
                     /note="1 base at the 3' end does not align to the human
                     genome."
BASE COUNT          481 a          557 c          532 g          639 t
ORIGIN      
        1 acgagggtga tctcagttta ctgcagtctc aaccccccaa gctcaggtga tcctcacact
       61 tcggcccctg cgtgtagctg ggaccacagg tgcatgtcac cactcatggc tactttttgt
      121 attttttaat taagtacaat ttccatttta tttttctcaa gagaatagtc cgtcttcaga
      181 ctttaaggac tcaactcctt acgtgggctt tggtgggggt tgtggggcag catccgcagg
      241 tctaaattgg agtaggggtg ttcagtcctt gtgggcttca caagatcgat tcctgactac
      301 tttgctgtga attgcacaac tcagacagta atgtagcttc aaatacagct tgggaagcac
      361 ataggcatca aagacgctcg cttcagaaat gtccctgact gctgcagcct ccactgtgtt
      421 tccaatgatg aatttgttaa tagccttgtc cttgggcaca cattgggcac agttcgtgtc
      481 gcaaataggc tgcacgtggc cgcggccctt tttggtacga ccgttgttcc ttcttttttt
      541 catcatattg gaggcacgga ctggaggaag cactaatttt tgtattttta ttagagatgg
      601 ggtttcaccg tgttgcccgg gctggtctca acctctgagg ctcaggcagt cttcccacct
      661 tggcctcccg aagtgctggg gttgcgggtg tgagccacca cacccagcct gtttctgctt
      721 tttaaagcaa cagtaaatat atttttattt tattttattt tttgagacag gctcttactc
      781 tgccaccaag gctggagtgc agtggtatga tcatggctca ctgcagcctt tggcttcgtg
      841 ggctcaagcg atccccccgc ctcagcctcc caagtagttg ggaccgcggg ttcaagccac
      901 cacgcccagc taatttttaa attttttttt gtagagatag agtctctctg ttgctcaggc
      961 tggtctcaaa cagctgggtt caagggatcc tcccaccttg ccctcccaag gtgcttggat
     1021 tccaggcttg agccactgtg cctggccaac agtaaatatt tgtgatttat tttttcccac
     1081 cctcactttc cctggagaag ttagctgggc tgtagcaagc tgcgctatcc atggtcccac
     1141 ctagaatttt ggaggtggct cggctggaag gcacagctgg ccctcacggt tattttgagc
     1201 ctaactgtaa atgtctctga gcctcccttg tgcattcttt gtagacccca ttaggaacgg
     1261 gcctctgggg agtctcacct gtggcctcgc ggagcacacc tgggttggag cagaggccac
     1321 ggaggagtgc cactgtgctc tttagggtta gctcgcgcct ctttttcttc ttagcttcac
     1381 cctcagcctc tatgttggcc gtgggcacta tggattggga ctgatgttgc agttgctttt
     1441 aattgagact agtaccctga ccaggcatac gtatctaagg acgtgggacc acacactggg
     1501 tcctggtgtg aggcaaggca gggatccaaa aacaaacagg aattcaccac cctcgccttc
     1561 agctcaacaa aggaaaggaa agtctctttg ctttgccaat gcctgcatag gtatctgtta
     1621 gtttatttct cttcctagag ctggacctga gtgcctgtct ttttaactga tggccatcta
     1681 catcttttga ccctctgcct tcttgactgt ccatttttag ctaatcaaaa cccttcatgt
     1741 catatttggt agatgcgtga ccctcttttc tctctgtgtt ttattcatta attccttctt
     1801 aataaaatga gtatctgtaa acctgatatc taataatctg aatatatgtc tatccacgtg
     1861 ctcctccctg cctctctccc tccaggtaac ctctggtttg aattttatgt gccaggcgtg
     1921 gtggctcaca cctgtaatcc cagcactttg ggaggtcgag gcaggcagat cacaaggtca
     1981 ggagatcgag accatcctgg ctaacacggt gaaaccctgt ctctactaaa aatacaaaaa
     2041 aattcgccgg gcatggtggt gggcgcttgt ggtcccagct actcaggagg ctgaggcggg
     2101 ataatggcat ggacccggga ggcggagctt gcagtgagct gagattgcgc cactgcactc
     2161 cagcctgggc gacagagcga gactccatct caaaaaaaaa aaaaaaaaa
//