LOCUS BC006160 712 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens oxysterol binding protein-like 9, mRNA (cDNA clone
IMAGE:3638030), partial cds.
ACCESSION BC006160
VERSION BC006160.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 712)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 712)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC006160.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: j Column: 23.
FEATURES Location/Qualifiers
source 1..712
/db_xref="H-InvDB:HIT000086606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3638030"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..712
/gene="OSBPL9"
/gene_synonym="FLJ12492"
/gene_synonym="FLJ14629"
/gene_synonym="FLJ14801"
/gene_synonym="FLJ32055"
/gene_synonym="FLJ34384"
/gene_synonym="MGC15035"
/gene_synonym="ORP9"
/db_xref="GeneID:114883"
/db_xref="MIM:606737"
CDS <1..381
/gene="OSBPL9"
/gene_synonym="FLJ12492"
/gene_synonym="FLJ14629"
/gene_synonym="FLJ14801"
/gene_synonym="FLJ32055"
/gene_synonym="FLJ34384"
/gene_synonym="MGC15035"
/gene_synonym="ORP9"
/codon_start=1
/product="OSBPL9 protein"
/protein_id="AAH06160.2"
/db_xref="GeneID:114883"
/db_xref="MIM:606737"
/translation="SPNDKKSFCSIEGEWNGVMYAKYATGENTVFVDTKKLPIIKKKV
RKLEDQNEYESRSLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETR
LFHEDGECWVYDEPLLKRLGAAKH"
misc_feature 4..312
/gene="OSBPL9"
/gene_synonym="FLJ12492"
/gene_synonym="FLJ14629"
/gene_synonym="FLJ14801"
/gene_synonym="FLJ32055"
/gene_synonym="FLJ34384"
/gene_synonym="MGC15035"
/gene_synonym="ORP9"
/note="Oxysterol_BP; Region: Oxysterol-binding protein"
/db_xref="CDD:pfam01237"
BASE COUNT 260 a 119 c 158 g 175 t
ORIGIN
1 tctccaaatg acaagaagtc tttttgctca attgaagggg aatggaatgg tgtgatgtat
61 gcaaaatatg caacagggga aaatacagtc tttgtagata ccaagaagtt gcctataatc
121 aagaagaaag tgaggaagtt ggaagatcag aacgagtatg aatcccgcag cctttggaag
181 gatgtcactt tcaacttaaa aatcagagac attgatgcag caactgaagc aaagcacagg
241 cttgaagaaa gacaaagagc agaagcccga gaaaggaagg agaaggaaat tcagtgggag
301 acaaggttat ttcatgaaga tggagaatgc tgggtttatg atgaaccatt actgaaacgt
361 cttggtgctg ccaagcatta ggttggaaga tgcaaagttt atacctgatg atcagggcag
421 taggcataat tcagcaacaa acaatcttcc tttgggagaa acctgttcat tccaatcttc
481 taattacagt ggttcctatc tcagggatac tggactttct gacgcagatg aacaattaag
541 gggaaaagct tcccttttcc ctctgtggca gttacgattt tgacttcagt cctgagaaaa
601 acttcaggtt ttgaaaatca gatgatgtct tctccttttc caaacaccac acgttgaaag
661 catttataaa tccaagtctg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//