LOCUS BC006107 2937 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens Rho GTPase activating protein 9, mRNA (cDNA clone
MGC:12959 IMAGE:3010091), complete cds.
ACCESSION BC006107
VERSION BC006107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2937)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2937)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: b Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14210509.
FEATURES Location/Qualifiers
source 1..2937
/db_xref="H-InvDB:HIT000032609"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12959 IMAGE:3010091"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2937
/gene="ARHGAP9"
/gene_synonym="10C"
/gene_synonym="RGL1"
/db_xref="GeneID:64333"
/db_xref="HGNC:HGNC:14130"
/db_xref="MIM:610576"
CDS 407..2659
/gene="ARHGAP9"
/gene_synonym="10C"
/gene_synonym="RGL1"
/codon_start=1
/product="ARHGAP9 protein"
/protein_id="AAH06107.1"
/db_xref="GeneID:64333"
/db_xref="HGNC:HGNC:14130"
/db_xref="MIM:610576"
/translation="MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVS
LAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLL
WTPGPKLFHGSLEELSQALPSRAQASSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGP
SGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDA
WEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKG
FRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKI
AQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAH
GRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTG
RDQGSGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTE
QNRVRNKLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAV
DKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEW
DDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNH
DTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQL
MLTNFTSLFP"
BASE COUNT 677 a 856 c 832 g 572 t
ORIGIN
1 gctggaagca acagatgggg actgcagagg aggtggtggt attgggatag tgctgcagcc
61 aagaacttaa cgactgaaag taactgggat atcttcataa ttatctgaag gtcacagtgg
121 gagaacaaaa ttaaaagaac tgagaagact tacaagagaa cctcctaaga gtcacccaaa
181 caatcggctg agaatgagaa gaggttcaag tgattcttgt gcctcaggct cccaagtagc
241 tgggactaca gtagctgggc cagcacaccc agaaagcctc acattgtgca gtggagaagc
301 tgagagaaga ggaaaagagg agtggccaga ctcccaccac tacccaggac caactcctgc
361 tcctgaatct tctgatgggc cccacaaggt gacagtgctg gctacaatgc tatccagccg
421 gtggtggcca agttcctggg ggatcctagg gctgggcccc cgaagccctc ctcggggatc
481 ccagctctgt gccctctatg cctttactta tactggggca gatggccagc aggtgtctct
541 ggctgaaggg gataggttcc tactgcttcg aaagaccaac tccgactggt ggttggcaag
601 acgcctagaa gctccctcca cctctcgacc catcttcgtc ccagcagcct atatgataga
661 ggaatccatc ccttcccaga gtccaactac cgtcatcccc ggccaattgc tctggactcc
721 tgggccgaag ttgtttcatg gttccctgga ggagttgtct caggccctcc caagcagggc
781 tcaggctagc tcggagcagc ctcctccact tccccgcaaa atgtgtagga gcgtcagcac
841 tgacaatctg agccccagct ttctgaagcc tttccaggaa ggaccaagcg gaagatccct
901 ctcccaggaa gacttgccgt cagaagccag tgccagcaca gcaggccccc agcccctcat
961 gtcagagccc cctgtgtact gtaacctggt ggaccttcgc cgctgtcctc ggtccccacc
1021 cccaggccct gcatgccccc tgctgcagag gctggatgcc tgggagcagc acctggaccc
1081 caactctgga cgctgcttct acataaattc actgactggc tgcaagtcct ggaagccccc
1141 gcgccgcagt cgcagcgaga cgaaccctgg ctccatggag gggacacaga ccctgaagag
1201 gaacaatgat gtcctgcaac ctcaggcaaa gggcttcaga tctgacacag ggaccccaga
1261 accgcttgac ccacagggtt cactcagcct cagccaacgc acctcgcagc ttgaccctcc
1321 agccttgcag gcccctcgac ctctgccgca gctcctggac gacccccatg aggtggaaaa
1381 gtcgggtctg ctcaacatga ccaagattgc ccaagggggg cgcaagctca ggaagaactg
1441 gggcccgtct tgggtggtgt taacgggtaa cagcctggtg ttctaccgag agccaccgcc
1501 gacagcgccc tcctcaggct ggggaccagc gggtagccgg cccgaaagta gcgtggacct
1561 gcgcggggcg gccctggcgc acggccgcca cctgtccagc cgccgcaacg tcctgcacat
1621 ccgcacgatc cctggccacg agttcctgct gcagtcggac cacgagacag agctgcgagc
1681 ctggcaccgc gcgctgcgga ctgtcatcga gcggctggtt agatgggtgg aggcccggag
1741 ggaggctccg accggccggg accaagggag tggggatcgg gagaaccccc tggagctgcg
1801 tctgtcgggc tctggacccg cggagctgag cgccggggag gacgaagaag aggagtcgga
1861 gctggtgtcc aagccgctgc tgcgcctcag cagccgccgg agctccattc gggggcccga
1921 aggcaccgag cagaaccgcg tgcgcaacaa actaaagcgg ctcatcgcga agagaccgcc
1981 cttacaaagc ctgcaggagc ggggtctgct ccgagaccag gtgttcggct gccagttgga
2041 atcactctgc cagcgggaag gagacacggt gcccagcttt ttgcggctct gcattgctgc
2101 tgtggataaa agaggtctag atgtggatgg catttatcgg gtgagcggga acttggcagt
2161 ggtccagaag cttcgctttc tggtggacag agagcgtgcg gtcacctccg atgggaggta
2221 tgtgttccca gaacagccag gacaagaagg tcggttagat ttggacagta ctgagtggga
2281 tgacattcat gtggtcaccg gagccctgaa gctttttctc cgggagctgc cccagcctct
2341 ggtgccacca ctgctgctgc cccatttccg tgctgccctt gcactctccg aatcagagca
2401 gtgcctctct cagatacaag aattaatagg ctcaatgcca aagcccaacc atgacactct
2461 acggtacctc ctggagcatt tatgcagggt gatagcacac tcagataaga atcgcatgac
2521 accccacaac ctgggaattg tgtttggacc aaccctgttt cggccagagc aggagacatc
2581 tgacccagca gcccatgctc tctacccagg gcagctggtc cagctgatgc tcaccaactt
2641 caccagcctc ttcccctgat gcagggaagg aagaagagaa aacatatttc cggtcatctc
2701 tggtggtgag aggctggtgt tctgttttga ggatatccct ttaaatctcc caaatgactg
2761 tctctatctt catgagtgtg acttgaggtg ttgggatggg tgagggagct tctctaaaga
2821 ggaaagtgag tggattaacc cctgcttctc ttcttgttcc ctgttatcat tcctccccaa
2881 cataataata cataaagtgg catggtattt ttaaaaaaaa aaaaaaaaaa aaaaaaa
//