LOCUS BC005770 2034 bp mRNA linear ROD 09-JUN-2008
DEFINITION Mus musculus beclin 1, autophagy related, mRNA (cDNA clone MGC:6843
IMAGE:2650059), complete cds.
ACCESSION BC005770
VERSION BC005770.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2034)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2034)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lothar Hennighausen Ph.D., Chu-Xia Deng Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 5 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27764874.
FEATURES Location/Qualifiers
source 1..2034
/organism="Mus musculus"
/mol_type="mRNA"
/strain="129,C57BL/6J,FVB/N"
/db_xref="taxon:10090"
/clone="MGC:6843 IMAGE:2650059"
/tissue_type="Mammary tumor. Brca1-/fl; MMTV-Cre model. 10
months old, gross tissue."
/clone_lib="NCI_CGAP_Mam3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2034
/gene="Becn1"
/gene_synonym="4921513J16Rik"
/gene_synonym="5430417M23Rik"
/db_xref="GeneID:56208"
/db_xref="MGI:MGI:1891828"
CDS 120..1466
/gene="Becn1"
/gene_synonym="4921513J16Rik"
/gene_synonym="5430417M23Rik"
/codon_start=1
/product="beclin 1, autophagy related"
/protein_id="AAH05770.1"
/db_xref="GeneID:56208"
/db_xref="MGI:MGI:1891828"
/translation="MEGSKASSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAP
LLTTAQAKPGETQEEEANSGEEPFIETRQDGVSRRFIPPARMMSTESANSFTLIGEAS
DGGTMENLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNY
KRCLEILEQMNEDDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAE
RLDQEEAQYQREYSEFKRQQLELDDELKSVENQVRYAQIQLDKLKKTNVFNATFHIWH
SGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNH
SYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPY
RMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK"
BASE COUNT 550 a 434 c 556 g 494 t
ORIGIN
1 gggaagtagc tgaagaccgg gcgatgggaa ctctggaggt ctcgctccgg ggcggacccg
61 aggccaccgt gcccccgcgg tagaacgagc ctgggtggcg ggctccgggc tcctgaggca
121 tggaggggtc taaggcgtcc agcagcacca tgcaggtgag cttcgtgtgc cagcgctgta
181 gccagcctct gaaactggac acgagcttca agatcctgga ccgggtcacc atccaggaac
241 tcacagctcc attacttacc acagcccagg cgaaaccagg agagacccag gaggaagagg
301 ctaactcagg agaggagcca tttattgaaa ctcgccagga tggtgtctct cgaagattca
361 tccccccagc caggatgatg tctacagaaa gtgctaatag cttcactctg atcggggagg
421 catctgatgg tggcaccatg gagaacctca gccggagact caaggtcact ggagacctgt
481 ttgacatcat gtcgggccag accgatgtgg atcacccgct gtgtgaggaa tgcacagaca
541 ctcttttaga ccagctggac actcagctca atgtcactga gaatgaatgt cagaactaca
601 aacgctgttt ggagatccta gagcagatga atgaggatga cagtgagcag ctgcagaggg
661 agctgaagga gctggccttg gaggaggaga ggctgatcca ggagctggaa gatgtggaaa
721 agaaccgcaa ggtggtggca gagaacctgg agaaggtcca ggctgaggcg gagagattgg
781 accaggagga agctcagtac cagcgggagt atagtgagtt taaaaggcag cagctggagt
841 tggatgacga actcaagagt gtggagaacc aggtgcgcta cgcccagatc cagctggaca
901 agctcaagaa aaccaatgtc ttcaatgcca ccttccacat ctggcacagc ggacagtttg
961 gcacaatcaa taatttcaga ctgggtcgct tgcccagtgt tcctgtggag tggaatgaaa
1021 tcaatgctgc ctggggccag acagtgctgc tgctccatgc tttggccaat aagatgggtc
1081 tgaagtttca gaggtaccga cttgttccct atggaaatca ttcctatctg gagtctctga
1141 cagacaaatc taaggagttg ccgttatact gttctggggg tttgcggttt ttctgggaca
1201 acaagtttga ccatgcaatg gtagcttttc tggactgtgt gcagcagttc aaagaagagg
1261 tggaaaaagg agagactcga ttttgtcttc cgtacaggat ggacgtggag aaaggcaaga
1321 ttgaagacac tggaggcagt ggcggctcct attccatcaa aacccagttt aactcggagg
1381 agcagtggac aaaagcgctc aagttcatgc tgaccaatct caagtggggt cttgcctggg
1441 tgtcctcaca gttctataac aagtgacttg ctccttaggg gatgtttgcc tttaaggttt
1501 tatactttgt ttggtttgga aagatgcttt aaattaaatt tgggtaatat taaaccacat
1561 gtttacaata ccaaaatcca caaaagctac tttattttca aatatgacag atagtttcca
1621 gagtacgcca tgtatagcaa agaaccctgc catagttttg actcagcccc atgcatcctt
1681 tccctctttc ctgaaaacaa ctaatttaaa tttgctttgt tttctttttt aagttgaatt
1741 gacgttaatg tgttttcact ggattttatc tctctcaact tcctgcactt aaaatttgaa
1801 acagcaaagg tttgagatga gatgcttgtg gcacacagtt gggtgatgtg gggaaaggac
1861 accgggtcag gagttgcaag tttaactccg tcctcacttg tagcattgaa tgcctcctgt
1921 gctgtctagt gggactacag aatgctgttt gatactgtgt gcgacgtgga gagatttaat
1981 tatttgtaat aaaggatttg ctatggtcta ttaaaaaaaa aaaaaaaaaa aaaa
//