LOCUS BC005375 1358 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens peroxisomal membrane protein 3, 35kDa, mRNA (cDNA
clone MGC:12491 IMAGE:3934225), complete cds.
ACCESSION BC005375
VERSION BC005375.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: h Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506342.
FEATURES Location/Qualifiers
source 1..1358
/db_xref="H-InvDB:HIT000032420"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12491 IMAGE:3934225"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1358
/gene="PXMP3"
/gene_synonym="PAF-1"
/gene_synonym="PAF1"
/gene_synonym="PEX2"
/gene_synonym="PMP3"
/gene_synonym="PMP35"
/gene_synonym="RNF72"
/db_xref="GeneID:5828"
/db_xref="HGNC:HGNC:9717"
/db_xref="MIM:170993"
CDS 228..1145
/gene="PXMP3"
/gene_synonym="PAF-1"
/gene_synonym="PAF1"
/gene_synonym="PEX2"
/gene_synonym="PMP3"
/gene_synonym="PMP35"
/gene_synonym="RNF72"
/codon_start=1
/product="peroxisomal membrane protein 3, 35kDa"
/protein_id="AAH05375.1"
/db_xref="GeneID:5828"
/db_xref="HGNC:HGNC:9717"
/db_xref="MIM:170993"
/translation="MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGF
KPGLLARFEPEVKACLWVFLWRFTIYSKNATVGQSVLNIKYKNDFSPNLRYQPPSKNQ
KIWYAVCTIGGRWLEERCYDLFRNHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQR
GKFATLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKA
KLSSWCIPLTGAPNSDNTLATSGKECALCGEWPTMPHTIGCEHIFCYFCAKSSFLFDV
YFTCPKCGTEVHSLQPLKSGIEMSEVNAL"
BASE COUNT 417 a 248 c 296 g 397 t
ORIGIN
1 gaagccttgg taatccagat tcggctagga aaagacaagc tttccagaga atgtttcaga
61 gaaagttacg tggagcgtgg gcgtttcgca gactcctaag cttctggcaa gtatgaggca
121 aggatttcac agaagaactt ggagcaaaaa ttcccactgt catagctata ggctgtccag
181 tcttgaggga gctgcaggaa caggaaaaag agaccttcag agaagacatg gcttccagaa
241 aagagaatgc gaagagtgca aacagagtgc taagaataag ccagttggat gcacttgaac
301 taaacaaggc cctggagcag ctagtttggt cccagtttac tcagtgcttt catggattta
361 aacctgggct gttagctcgc tttgagccag aggtgaaagc gtgcttatgg gttttcttgt
421 ggagattcac catctactcc aaaaatgcca cagtgggaca gtcagttttg aatattaagt
481 acaaaaatga tttttcccct aacctgagat atcagccacc cagtaaaaat caaaaaatct
541 ggtatgctgt ttgtacaatt ggtggcaggt ggttagaaga acgatgctat gatttgtttc
601 gaaaccatca tttagcatca tttgggaaag tcaagcagtg tgtgaatttt gtgattggac
661 ttttgaaatt aggtgggctg attaattttt tgattttcct tcagagggga aagtttgcaa
721 ctttgacaga acgtctccta ggtattcatt ctgtattttg caagcctcaa aacatacgtg
781 aagttggctt tgaatacatg aatagggaac ttctctggca tggttttgct gaatttctga
841 tttttctctt accacttatc aatgtccaga agttgaaagc caagctgtct tcatggtgta
901 ttcctcttac tggtgcacct aatagtgaca atacattagc caccagtggc aaagaatgcg
961 ctctatgtgg agagtggccc accatgcctc acaccatagg atgtgagcat attttctgtt
1021 atttctgtgc taagagtagt ttcttatttg acgtgtactt tacttgtcct aagtgtggca
1081 cagaagtaca cagtctgcag ccactgaaat caggaatcga gatgtcagaa gtaaatgctc
1141 tttagaaact aaaattgctt cctttgagga aaaaaatgca ccgtgtttaa attcttaata
1201 ttagtcatcc taagtatacc atttatgtat cctttataag gaatgtgctc ctagccactg
1261 tcttctcctt tccaggcatg actgaaatct aatcactgga aaccatgtga ttctaaatat
1321 attatgtaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//