LOCUS BC005005 2144 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromosome 17 open reading frame 80, mRNA (cDNA clone MGC:1012 IMAGE:3544728), complete cds. ACCESSION BC005005 VERSION BC005005.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2144) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2144) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC005005.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: n Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222156. FEATURES Location/Qualifiers source 1..2144 /db_xref="H-InvDB:HIT000032151" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1012 IMAGE:3544728" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2144 /gene="C17orf80" /gene_synonym="FLJ20721" /gene_synonym="HLC-8" /gene_synonym="MIG3" /db_xref="GeneID:55028" /db_xref="HGNC:HGNC:29601" CDS 115..1944 /gene="C17orf80" /gene_synonym="FLJ20721" /gene_synonym="HLC-8" /gene_synonym="MIG3" /codon_start=1 /product="chromosome 17 open reading frame 80" /protein_id="AAH05005.1" /db_xref="GeneID:55028" /db_xref="HGNC:HGNC:29601" /translation="MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQS KPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLER AATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSG ESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLV KLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTE SLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCEN FNTRDSVTGKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEAQ NHNCVPDVKALMESPEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHAAA AGRKTLRSCMGLEWFPELYPGYLGLGVLPGKPQCWNAMTQKPQLISPQGERLSQVSLL ERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQKGWIRCNTTIRKSGFGGITMLFTGYFV LCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTGDCRSKTCLD" BASE COUNT 685 a 469 c 486 g 504 t ORIGIN 1 ggctgacatt cacgtttcat tctgccacac tcgggaacgg tgatcgggga agcatgggga 61 tccgggagaa gcacccacaa aactagcatc ctcctggagg agctcgggaa taggatgagt 121 gataatccac ccagaatgga agtgtgtcct tactgtaaga agccatttaa acgattaaaa 181 tcccacttgc catactgtaa gatgatagga ccaaccatac ctactgatca aaaagtttat 241 cagtccaagc cagctacact cccacgtgct aaaaagatga aaggaccaat caaagattta 301 attaaagcta aagggaaaga gttagagaca gagaatgaag aaagaaattc taagttggtg 361 gtggacaaac cagaacagac agtgaagacc tttccactgc cagctgttgg tttggaaaga 421 gcagctacta caaaggcaga taaagacatc aagaatccaa tccaaccatc cttcaaaatg 481 ttaaaaaata ctaaaccaat gactactttc caagaagaaa ccaaggctca gttttacgca 541 tcagagaaaa cctctcctaa aagagaactt gccaaagatt tgcctaaatc aggagaaagt 601 cgatgtaatc cttcagaagc tggagcgtct ttactggttg gctcaataga accttctttg 661 tcaaatcaag atagaaaata ttcctcaact ctacctaatg atgtacaaac tacctctggt 721 gatctcaaat tggacaaaat tgatccccaa agacaggaac ttctagtaaa attactagat 781 gtgcctactg gtgattgtca tatttctcca aagaatgtca gtgatggggt taaaagggta 841 agaacattat taagcaatga gagagattcc aaaggcaggg atcacctctc aggagtccct 901 actgatgtta cagttactga gactccagaa aagaacacag aatccctcat tttaagcctt 961 aaaatgagct cattaggtaa aatccaagtc atggagaaac aagagaaagg acttaccctg 1021 ggagtagaga cgtgtgggag caaaggaaat gcagagaaaa gtatgtctgc aacagaaaag 1081 caggaacgga ctgtcatgag ccatggctgt gagaacttca acaccaggga ttcagtcaca 1141 ggaaaggagt ctcaagggga aagaccacat ttaagtttgt tcattccgag ggagacgact 1201 taccagtttc attctgtatc gcagtcaagt agtcaaagtc ttgcctctct agctacaaca 1261 tttcttcaag aaaagaaagc agaagcccag aatcataatt gtgtccctga tgtaaaggca 1321 ttaatggaga gtcccgaggg acagttatct ctggagccca aatctgatag tcagttccaa 1381 gcatcacaca ctgggtgcca gagcccttta tgttcagccc agcgtcacac tcctcagagc 1441 cccttcacca atcatgctgc agctgctggc aggaagactc ttcgcagctg catggggctg 1501 gagtggtttc cagagctcta tcctggttac cttggactag gggtgttgcc agggaagcct 1561 cagtgttgga atgcaatgac ccagaagcca caacttatca gtccccaggg ggaaagactc 1621 tcacaagttt ctttgttgga acgaagctca actcatataa ggagtttgga accccctgcc 1681 ggacttacaa cctccaactt ctctctaatg aggctcttgg gagctgtaca aaaaggctgg 1741 atcaggtgca acaccaccat aaggaagagt ggattcggtg gcatcactat gctcttcaca 1801 ggatacttcg tcctgtgttg tagctggagt ttcagacgtc tgaaaaaatt gtgccgaccc 1861 ctgccctgga agagcacagt acctccatgc attggtgtgg cgaagacgac tggggattgc 1921 cgctctaaaa catgtttgga ttaggaagca cgtttaagta ggagaagcct tcgtgacttc 1981 tctctagtgc cttcgtgccc tgtgttgccc actgaattgc cctgtaacac ctaagtgtag 2041 tggtagcatt aagggatagc ttttcagccc tcaaggttat caggagcatt tgtatcactg 2101 ctataaataa agtagtatca cttgtcaaaa aaaaaaaaaa aaaa //