LOCUS BC004430 1566 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11, mRNA (cDNA clone MGC:3844 IMAGE:2820583), complete
cds.
ACCESSION BC004430
VERSION BC004430.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1566)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1566)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: c Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872724.
FEATURES Location/Qualifiers
source 1..1566
/db_xref="H-InvDB:HIT000031936"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3844 IMAGE:2820583"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1566
/gene="PSMD11"
/gene_synonym="MGC3844"
/gene_synonym="p44.5"
/gene_synonym="S9"
/db_xref="GeneID:5717"
/db_xref="HGNC:HGNC:9556"
/db_xref="MIM:604449"
CDS 9..1277
/gene="PSMD11"
/gene_synonym="MGC3844"
/gene_synonym="p44.5"
/gene_synonym="S9"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11"
/protein_id="AAH04430.1"
/db_xref="GeneID:5717"
/db_xref="HGNC:HGNC:9556"
/db_xref="MIM:604449"
/translation="MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQ
VKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAA
TGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM
DDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIH
AAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLA
LRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQN
LIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPP
VDKTYEAALETIQNMSKVVDSLYNKAKKLT"
BASE COUNT 468 a 338 c 389 g 371 t
ORIGIN
1 gcggtaagat ggcggcggcg gcggtggtgg agttccagag agcccagtct ctactcagca
61 ccgaccggga ggcctccatc gacatcctcc actccatcgt gaagcgtgac attcaggaaa
121 acgatgaaga ggcagtgcaa gtcaaagagc agagcatcct ggaactggga tctctcctgg
181 caaagactgg acaagctgca gagcttggag gactcctgaa gtatgtacga cccttcttga
241 attccatcag caaggctaaa gcagctcgcc tggtccgatc tcttcttgat ctgtttcttg
301 atatggaagc agctacaggg caggaggtcg agctgtgttt agagtgcatc gaatgggcca
361 agtcagagaa aagaactttc ttacgccaag ctttggaggc aagactggtg tctttgtact
421 ttgataccaa gaggtaccag gaagcattgc atttgggttc tcagctgctg cgggagttga
481 aaaagatgga cgacaaagct cttttggtgg aagtacagct tttagaaagc aaaacatacc
541 atgccctgag caacctgccg aaagcccgag ctgccttaac ttctgctcga accacagcaa
601 atgccatcta ctgcccccct aaattgcagg ccaccttgga catgcagtcg ggtattatcc
661 atgcagcaga agagaaggac tggaaaactg cgtactcata cttctatgag gcatttgagg
721 gttatgactc catcgacagc cccaaggcca tcacatctct gaagtacatg ttgctgtgca
781 aaatcatgct caacacccca gaagatgtcc aggctttggt gagcgggaag cttgcacttc
841 ggtatgcagg gaggcagaca gaagcattaa aatgcgtggc tcaggctagc aagaacagat
901 cactggcaga ttttgaaaag gctctgacag attaccgggc agagctccgg gatgacccaa
961 tcatcagcac acacttggcc aagttgtatg ataacttact agaacagaat ctgatccgag
1021 tcattgagcc tttttccaga gtacagattg aacacatatc tagtctcatc aaactctcca
1081 aggccgacgt ggaaaggaaa ttatcacaga tgattcttga caagaaattt catgggattt
1141 tggaccaggg ggagggtgtc ctgattattt tcgatgaacc cccagtagat aaaacttacg
1201 aagctgctct ggaaacaatt cagaacatga gcaaagtagt ggattccctc tacaacaaag
1261 ccaagaaact gacatagagt tggatctgta gcggtccttt ggagagtgtg tgtggcggga
1321 gagtgaaacc ttgggggaaa atgctaggag attctttttt ctttttgttc tacttttcgc
1381 tcggaaagtt tttaaatcct catttggtgc atctgtattc cagccaatag gtgtgccagt
1441 tttcatgtaa tctttactgg cccaacttgg gagtggggaa attgcttaaa aaaaaagaaa
1501 aagaaaaaaa aaaagattat tctaaataaa aggaaaaagg cttacactaa aaaaaaaaaa
1561 aaaaaa
//