LOCUS BC004365 1193 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens StAR-related lipid transfer (START) domain containing
5, mRNA (cDNA clone MGC:10327 IMAGE:3641640), complete cds.
ACCESSION BC004365
VERSION BC004365.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1193)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569455.
FEATURES Location/Qualifiers
source 1..1193
/db_xref="H-InvDB:HIT000031890"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10327 IMAGE:3641640"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1193
/gene="STARD5"
/db_xref="GeneID:80765"
/db_xref="HGNC:HGNC:18065"
/db_xref="MIM:607050"
CDS 27..668
/gene="STARD5"
/codon_start=1
/product="StAR-related lipid transfer (START) domain
containing 5"
/protein_id="AAH04365.2"
/db_xref="GeneID:80765"
/db_xref="HGNC:HGNC:18065"
/db_xref="MIM:607050"
/translation="MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSV
EFPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTS
TPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFC
EPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPRSMTRFYANLQKAVKQFHE"
BASE COUNT 306 a 329 c 295 g 263 t
ORIGIN
1 cgcagctaag cgcagctccc gacgcaatgg acccggcgct ggcagcccag atgagcgagg
61 ctgtggccga gaagatgctc cagtaccggc gggacacagc aggctggaag atttgccggg
121 aaggcaatgg agtttcagtt tcctggaggc catctgtgga gtttccaggg aacctgtacc
181 gaggagaagg cattgtatat gggacactag aggaggtgtg ggactgtgtg aagccagctg
241 ttggaggcct acgagtgaag tgggatgaga atgtgaccgg ttttgaaatt atccaaagca
301 tcactgacac cctgtgtgta agcagaacct ccactccctc cgctgccatg aagctcattt
361 ctcccagaga ttttgtggac ttggtgctag tcaagagata tgaggatggg accatcagtt
421 ccaacgccac ccatgtggag catccgttat gtcccccgaa gccaggtttt gtgagaggat
481 ttaaccatcc ttgtggttgc ttctgtgaac ctcttccagg ggaacccacc aagaccaacc
541 tggtcacatt cttccatacc gacctcagcg gttacctccc acagaacgtg gtggactcct
601 tcttcccccg cagcatgacc cggttttatg ccaaccttca gaaagcagtg aagcaattcc
661 atgagtaatg ctatcgttac ttcttggcaa agaactcccg tgactcatcg aggagctcca
721 gctgttggga caccaaggag cctgggagca cgcagaggcc tgtgttcact ctttggaaca
781 agctgatgga ctgcgcatct ctgagaatgc caaccagagg cggcagccca cccttcctgc
841 ctcctgcccc actcagggtt ggcgtgtgat gagccattca tgtgttccaa actccatctg
901 cctgttaccc aaacgcctct cctggcaggg tagacccagg cctctaacca tctgacagag
961 actcggcctg gacaccatgc gatgcactct ggcaccaagg ctttatgtgc ccatcactct
1021 cagagaccac gtttctctga ctgtcataga gaatcatcat cgccactgaa aaccaggccc
1081 tgttgccttt taagcatgta ccgctccctc agtcctgtgc tgcagccccc caaatatatt
1141 tttctgatat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aac
//