LOCUS BC004313 1525 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens asparagine-linked glycosylation 3, alpha-1,3-
mannosyltransferase homolog (S. cerevisiae), mRNA (cDNA clone
IMAGE:3627962), partial cds.
ACCESSION BC004313
VERSION BC004313.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1525)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1525)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: k Column: 10.
FEATURES Location/Qualifiers
source 1..1525
/db_xref="H-InvDB:HIT000086332"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3627962"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1525
/gene="ALG3"
/gene_synonym="CDGS4"
/gene_synonym="D16Ertd36e"
/gene_synonym="Not56"
/gene_synonym="NOT56L"
/db_xref="GeneID:10195"
/db_xref="HGNC:HGNC:23056"
/db_xref="MIM:608750"
CDS <1..1303
/gene="ALG3"
/gene_synonym="CDGS4"
/gene_synonym="D16Ertd36e"
/gene_synonym="Not56"
/gene_synonym="NOT56L"
/codon_start=2
/product="ALG3 protein"
/protein_id="AAH04313.1"
/db_xref="GeneID:10195"
/db_xref="HGNC:HGNC:23056"
/db_xref="MIM:608750"
/translation="RKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACL
CLAEVGITFWVIHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYI
FMGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVH
SIFVLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLL
TQFGFRGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPE
ALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIV
STLFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWN
TYPSTSCSSAALHICHAVILLQLWLGPQPFPKSTQHSKKAH"
BASE COUNT 295 a 491 c 377 g 362 t
ORIGIN
1 gcggaaacgc ggccggtccg gttccgcggc ccaggcagag ggactctgca agcaatggct
61 gcagcgcgcc tggcaagagc ggcgcctgct gctgcgggag ccgcgctaca cgctgctggt
121 ggccgcctgc ctctgcctgg cggaggtggg catcaccttc tgggtcattc acagggtggc
181 atacacagag attgactgga aggcctacat ggccgaggta gaaggcgtca tcaatggtac
241 ctatgactat acccaactgc agggtgacac cggaccactt gtgtacccag ctggtttcgt
301 gtacatcttt atggggttgt actatgccac cagccgaggc actgacatcc gcatggccca
361 gaacatcttt gctgtgctct acctggctac cttgctgctt gtcttcttga tctatcacca
421 gacctgcaag gtacctccct tcgtcttttt cttcatgtgc tgcgcctctt accgtgtcca
481 ctccatcttt gtgctgcggc tcttcaatga cccagtggcc atggtgctgc tcttcctcag
541 tatcaacctc ctgctggccc agcgctgggg ctggggttgc tgctttttca gcctggcagt
601 ctctgtgaag atgaatgtgc tgctcttcgc ccctgggtta ctgtttcttc tcctcacaca
661 gtttggcttc cgtggggccc tccccaagct gggaatctgt gctggccttc aggtggtgct
721 ggggctgccc ttcctgctgg agaaccccag cggctacctg tcccgctcct ttgaccttgg
781 ccgccagttt ctgttccact ggacagtgaa ctggcgcttc ctcccagagg cgctcttcct
841 gcatcgagcc ttccacctgg ccctgttgac tgcccacctc accctgctcc tgctgtttgc
901 cctctgcagg tggcacagga caggggaaag tatcttgtcg ctgctgaggg atccctccaa
961 aaggaaggtt ccaccccagc cccttacacc caaccagatc gtttctaccc tcttcacctc
1021 caacttcatt ggcatctgct tcagccgctc cctccactac cagttctacg tctggtattt
1081 ccacacactg ccctacctcc tgtgggccat gcctgcacgc tggctcacac acctgctcag
1141 gttgttggtg ctggggctca tcgagctctc ctggaacaca tacccttcca catcctgcag
1201 ctctgctgcc ctgcacatat gccatgccgt catcctgctg cagctctggc tgggcccgca
1261 gcctttcccc aagagcaccc aacacagcaa gaaagcccac tgaagtccac ccctttccct
1321 caggacctga gtctaccctc aggacctggg gttggttgga ctctgccctt ccaaataaac
1381 cttgctaagt ccaactctgt gcaacctaca tggaggtggg ggcagccgat gcctggtcca
1441 ggctgtgagg gacacgtatg gagcagataa agaattcact caaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaa
//