LOCUS BC003565 2926 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hepatocyte growth factor-regulated tyrosine kinase substrate, mRNA (cDNA clone MGC:2045 IMAGE:3544197), complete cds. ACCESSION BC003565 VERSION BC003565.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2926) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2926) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: p Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24496766. FEATURES Location/Qualifiers source 1..2926 /db_xref="H-InvDB:HIT000031603" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2045 IMAGE:3544197" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2926 /gene="HGS" /gene_synonym="HRS" /gene_synonym="ZFYVE8" /db_xref="GeneID:9146" /db_xref="HGNC:HGNC:4897" /db_xref="MIM:604375" CDS 78..2411 /gene="HGS" /gene_synonym="HRS" /gene_synonym="ZFYVE8" /codon_start=1 /product="hepatocyte growth factor-regulated tyrosine kinase substrate" /protein_id="AAH03565.1" /db_xref="GeneID:9146" /db_xref="HGNC:HGNC:4897" /db_xref="MIM:604375" /translation="MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKY AVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEV NVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDW VDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQ LNRKAEGKATSTTELPPEYLTSPLSQQSQLPPKRDETALQEEEELQLALALSQSEAEE KERLRQKSTYTSYPKAEPMPSASSAPPASSLYSSPVNSSAPLAEDIDPELARYLNRNY WEKKQEEARKSPTPSAPVPLTEPAAQPGEGHAAPTNVVENPLPETDSQPIPPSGGPFS EPQFHNGESEESHEQFLKALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQSINGMH PQLLELLNQLDERRLYYEGLQDKLAQIRDARGALSALREEHREKLRRAAEEAERQRQI QLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQEKERQMRLEQQKQTVQMRAQMPAFPLP YAQLQAMPAAGGVLYQPSGPASFPSTFSPAGSVEGSPMHGVYMSQPAPAAGPYPSMPS TAADPSMVSAYMYPAGATGAQAAPQAQAGPTASPAYSSYQPTPTAGYQNVASQAPQSL PAISQPPQSSTMGYMGSQSVSMGYQPYNMQNLMTTLPSQDASLPPQQPYIAGQQPMYQ QMAPSGGPPQQQPPVAQQPQAQGPPAQGSEAQLISFD" BASE COUNT 621 a 963 c 876 g 466 t ORIGIN 1 cggaagcgga agtcgggggg cgcgccagct cgtagcaggg gagcgcccgc ggcgtcgggt 61 ttgggctgga ggtcgccatg gggcgaggca gcggcacctt cgagcgtctc ctagacaagg 121 cgaccagcca gctcctgttg gagacagatt gggagtccat tttgcagatc tgcgacctga 181 tccgccaagg ggacacacaa gcaaaatatg ctgtgaattc catcaagaag aaagtcaacg 241 acaagaaccc acacgtcgcc ttgtatgccc tggaggtcat ggaatctgtg gtaaagaact 301 gtggccagac agttcatgat gaggtggcca acaagcagac catggaggag ctgaaggacc 361 tgctgaagag acaagtggag gtaaacgtcc gtaacaagat cctgtacctg atccaggcct 421 gggcgcatgc cttccggaac gagcccaagt acaaggtggt ccaggacacc taccagatca 481 tgaaggtgga ggggcacgtc tttccagaat tcaaagagag cgatgccatg tttgctgccg 541 agagagcccc agactgggtg gacgctgagg aatgccaccg ctgcagggtg cagttcgggg 601 tgatgacccg taagcaccac tgccgggcgt gtgggcagat attctgtgga aagtgttctt 661 ccaagtactc caccatcccc aagtttggca tcgagaagga ggtgcgcgtg tgtgagccct 721 gctacgagca gctgaacagg aaagcggagg gaaaggccac ttccaccact gagctgcccc 781 ccgagtacct gaccagcccc ctgtctcagc agtcccagct gccccccaag agggacgaga 841 cggccctgca ggaggaggag gagctgcagc tggccctggc gctgtcacag tcagaggcgg 901 aggagaagga gaggctgaga cagaagtcca cgtacacttc gtaccccaag gcggagccca 961 tgccctcggc ctcctcagcg ccccccgcca gcagcctgta ctcttcacct gtgaactcgt 1021 cggcgcctct ggctgaggac atcgaccctg agctcgcacg gtatctcaac cggaactact 1081 gggagaagaa gcaggaggag gctcgcaaga gccccacgcc atctgcgccc gtgcccctga 1141 cggagccggc tgcacagcct ggggaagggc acgcagcccc caccaacgtg gtggagaacc 1201 ccctcccgga gacagactct cagcccattc ctccctctgg tggccccttt agtgagccac 1261 agttccacaa tggcgagtct gaggagagcc acgagcagtt cctgaaggcg ctgcagaacg 1321 ccgtcaccac cttcgtgaac cgcatgaaga gtaaccacat gcggggccgc agcatcacca 1381 atgactcggc cgtgctctca ctcttccagt ccatcaacgg catgcacccg cagctgctgg 1441 agctgctcaa ccagctggac gagcgcaggc tgtactatga ggggctgcag gacaagctgg 1501 cacagatccg cgatgcccgg ggggcgctga gtgccctgcg cgaagagcac cgggagaagc 1561 ttcgccgggc agccgaggag gcagagcgcc agcgccagat ccagctggcc cagaagctgg 1621 agataatgcg gcagaagaag caggagtacc tggaggtgca gaggcagctg gccatccagc 1681 gcctgcagga gcaggagaag gagcggcaga tgcggctgga gcagcagaag cagacggtcc 1741 agatgcgcgc gcagatgccc gccttccccc tgccctacgc ccagctccag gccatgcccg 1801 cagccggagg tgtgctctac cagccctcgg gaccagccag cttccccagc accttcagcc 1861 ctgccggctc ggtggagggc tccccaatgc acggcgtgta catgagccag ccggcccctg 1921 ccgctggccc ctaccccagc atgcccagca ctgcggctga tcccagcatg gtgagtgcct 1981 acatgtaccc agcaggggcc actggggcgc aggcggcccc ccaggcccag gccggaccca 2041 ccgccagccc cgcttactca tcctaccagc ctactcccac agcgggctac cagaacgtgg 2101 cctcccaggc cccacagagc ctcccggcca tctctcagcc tccgcagtcc agcaccatgg 2161 gctacatggg gagccagtca gtctccatgg gctaccagcc ttacaacatg cagaatctca 2221 tgaccaccct cccaagccag gatgcgtctc tgccacccca gcagccctac atcgcggggc 2281 agcagcccat gtaccagcag atggcaccct ctggcggtcc cccccagcag cagccccccg 2341 tggcccagca accgcaggca caggggccgc cggcacaggg cagcgaggcc cagctcattt 2401 cattcgactg acccaggcca tgctcacgtc cggagtaaca ctacatacag ttcacctgaa 2461 acgcctcgtc tctaactgcc gtcgtcctgc ctccctgtcc tctactgccg gtagtgtccc 2521 ttctctgcga gtgagggggg gccttcaccc caagcccacc tcccttgtcc tcagcctact 2581 gcagtccctg agttagtctc tgctttcttt ccccagggct gggccatggg gagggaagga 2641 ctttctccca ggggaagccc ccagccctgt gggtcatggt ctgtgagagg tggcaggaat 2701 ggggaccctc accccccaag cagcctgtgc cctctggccg cactgtgagc tggctgtggt 2761 gtctgggtgt ggcctggggc tccctctgca ggggcctctc tcggcagcca cagccaaggg 2821 tggaggcttc aggtctccag cttctctgct tctcagctgc catctccagt gccccagaat 2881 ggtacagcga taataaaatg tatttcagaa aaaaaaaaaa aaaaaa //