LOCUS BC003409 1400 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens OCIA domain containing 1, mRNA (cDNA clone MGC:4962
IMAGE:3450800), complete cds.
ACCESSION BC003409
VERSION BC003409.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: b Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923426.
FEATURES Location/Qualifiers
source 1..1400
/db_xref="H-InvDB:HIT000031552"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4962 IMAGE:3450800"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1400
/gene="OCIAD1"
/gene_synonym="Asrij"
/gene_synonym="OCIA"
/gene_synonym="TPA018"
/db_xref="GeneID:54940"
/db_xref="HGNC:HGNC:16074"
CDS 161..898
/gene="OCIAD1"
/gene_synonym="Asrij"
/gene_synonym="OCIA"
/gene_synonym="TPA018"
/codon_start=1
/product="OCIA domain containing 1"
/protein_id="AAH03409.1"
/db_xref="GeneID:54940"
/db_xref="HGNC:HGNC:16074"
/translation="MNGRADFREPNAEVPRPIPHIGPDYIPTEEERRVFAECNDESFW
FRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKF
KKLENSPLGEALRSGQARRSSPPGHYYQKSKYDSSVSGQSSFVTSPAADNIEMLPHYE
PIPFSSSMNESAPTGITDHIVQGPDPNLEESPKRKNITYEELRNKNRESYEVSLTQKT
DPSVRPMHERVPKKEVKVNKYGDTWDE"
BASE COUNT 443 a 277 c 279 g 401 t
ORIGIN
1 tgtctggatg acttcttgcg gctgttctac ccctccccct ccccgcggta ccttgcactt
61 ttctccctcc ctgccccctc tcgagtccac cctccgggcc ttctgcccct gatcgcttgg
121 ttttccttgc agtcgcctgc tgctgtcgtc gggaggaaag atgaatggga gggctgattt
181 tcgagagccg aatgcagagg ttccaagacc aattccccac atagggcctg attacattcc
241 aacagaggaa gaaaggagag tcttcgcaga atgcaatgat gaaagcttct ggttcagatc
301 tgtgcctttg gctgcaacaa gtatgttgat tactcaagga ttaattagta aaggaatact
361 ttcaagtcat cccaaatatg gttccatccc taaacttata cttgcttgta tcatgggata
421 ctttgctgga aaactttctt atgtgaaaac ttgccaagag aaattcaaga aacttgaaaa
481 ttcccccctt ggagaagctt tacgatcagg acaagcacga cgatcttcac cacctgggca
541 ctattatcaa aagtcaaaat atgactcaag tgtgagtggt caatcatctt ttgtgacatc
601 cccagcagca gacaacatag aaatgcttcc tcattatgag ccaattccat tcagttcttc
661 tatgaatgaa tctgctccca ctggtattac tgatcatatt gtccaaggac ctgatcccaa
721 ccttgaagaa agtcctaaaa gaaaaaatat tacatatgag gaattaagga ataagaacag
781 agagtcatat gaagtatctt taacacaaaa gactgacccc tcagtcaggc ctatgcatga
841 aagagtgcca aaaaaagaag tcaaagtaaa caagtatgga gatacttggg atgagtgaaa
901 aattacatca ttggacatga aggagtttca acatccagct tcatctaggt ggtcatgatt
961 acctgcatgc tttgagctca gcagcagtct tcataaacac atttaaaaca agatcctggg
1021 tttttgtggt ttgacttcta tggtgtttta aaaaaacaca gatttttagt gttaatattg
1081 tgtaaatgta ctcaccttag ggattcattt gaatgatggt attataccat gattgtatac
1141 agtttgtgaa attgttgcaa gggcaaagat aactcttaaa aaaccgtcga gattacaatg
1201 ctctagaatc agcatataag aaaataaatg atatctgcat gttgaattgg ggtggatggg
1261 gggagcaagc ataattttta agtgtgaagc tttgcatcaa gaaattatta aaaagctttt
1321 tttctccagt attttctgta ttatcttaat gtttatggca aataaaatgt aaaggaacat
1381 gcaaaaaaaa aaaaaaaaaa
//