LOCUS       BC003378                1207 bp    mRNA    linear   HUM 16-DEC-2006
DEFINITION  Homo sapiens high-mobility group box 1, mRNA (cDNA clone MGC:5223
            IMAGE:2901382), complete cds.
ACCESSION   BC003378
VERSION     BC003378.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1207)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 3 Row: j Column: 1
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 31982879.
FEATURES             Location/Qualifiers
     source          1..1207
                     /db_xref="H-InvDB:HIT000031529"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:5223 IMAGE:2901382"
                     /tissue_type="Cervix, carcinoma"
                     /clone_lib="NIH_MGC_12"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1207
                     /gene="HMGB1"
                     /gene_synonym="HMG3"
                     /gene_synonym="SBP-1"
                     /db_xref="GeneID:3146"
                     /db_xref="HGNC:HGNC:4983"
                     /db_xref="MIM:163905"
     CDS             77..724
                     /gene="HMGB1"
                     /gene_synonym="HMG3"
                     /gene_synonym="SBP-1"
                     /codon_start=1
                     /product="high-mobility group box 1"
                     /protein_id="AAH03378.1"
                     /db_xref="GeneID:3146"
                     /db_xref="HGNC:HGNC:4983"
                     /db_xref="MIM:163905"
                     /translation="MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKK
                     CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF
                     FLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA
                     AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE"
BASE COUNT          419 a          195 c          293 g          300 t
ORIGIN      
        1 gagacagcgc cggggcaagt gagagccgga cgggcactgg gcgactctgt gcctcgctga
       61 ggaaaaataa ctaaacatgg gcaaaggaga tcctaagaag ccgagaggca aaatgtcatc
      121 atatgcattt tttgtgcaaa cttgtcggga ggagcataag aagaagcacc cagatgcttc
      181 agtcaacttc tcagagtttt ctaagaagtg ctcagagagg tggaagacca tgtctgctaa
      241 agagaaagga aaatttgaag atatggcaaa ggcggacaag gcccgttatg aaagagaaat
      301 gaaaacctat atccctccca aaggggagac aaaaaagaag ttcaaggatc ccaatgcacc
      361 caagaggcct ccttcggcct tcttcctctt ctgctctgag tatcgcccaa aaatcaaagg
      421 agaacatcct ggcctgtcca ttggtgatgt tgcgaagaaa ctgggagaga tgtggaataa
      481 cactgctgca gatgacaagc agccttatga aaagaaggct gcgaagctga aggaaaaata
      541 cgaaaaggat attgctgcat atcgagctaa aggaaagcct gatgcagcaa aaaagggagt
      601 tgtcaaggct gaaaaaagca agaaaaagaa ggaagaggag gaagatgagg aagatgaaga
      661 ggatgaggag gaggaggaag atgaagaaga tgaagatgaa gaagaagatg atgatgatga
      721 ataagttggt tctagcgcag tttttttttc ttgtctataa agcatttaac ccccctgtac
      781 acaactcact ccttttaaag aaaaaaattg aaatgtaagg ctgtgtaaga tttgttttta
      841 aactgtacag tgtctttttt tgtatagtta acacactacc gaatgtgtct ttagatagcc
      901 ctgtcctggt ggtattttca atagccacta accttgcctg gtacagtatg ggggttgtaa
      961 attggcatgg aaatttaaag caggttcttg ttggtgcaca gcacaaatta gttatatatg
     1021 gggatggtag ttttttcatc ttcagttgtc tctgatgcag cttatacgaa ataattgttg
     1081 ttctgttaac tgaataccac tctgtaattg caaaaaaaaa aaaagttgca gctgttttgt
     1141 tgacattctg aatgcttcta agtaaataca atttttttta ttaaaaaaaa aaaaaaaaaa
     1201 aaaaaaa
//