LOCUS BC003030 2247 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 60kDa protein 1 (chaperonin), mRNA (cDNA
clone MGC:4335 IMAGE:2821157), complete cds.
ACCESSION BC003030
VERSION BC003030.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2247)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2247)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41399283.
FEATURES Location/Qualifiers
source 1..2247
/db_xref="H-InvDB:HIT000031372"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4335 IMAGE:2821157"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2247
/gene="HSPD1"
/gene_synonym="CPN60"
/gene_synonym="GROEL"
/gene_synonym="HSP60"
/gene_synonym="HSP65"
/gene_synonym="HuCHA60"
/db_xref="GeneID:3329"
/db_xref="HGNC:HGNC:5261"
/db_xref="MIM:118190"
CDS 47..1768
/gene="HSPD1"
/gene_synonym="CPN60"
/gene_synonym="GROEL"
/gene_synonym="HSP60"
/gene_synonym="HSP65"
/gene_synonym="HuCHA60"
/codon_start=1
/product="heat shock 60kDa protein 1 (chaperonin)"
/protein_id="AAH03030.1"
/db_xref="GeneID:3329"
/db_xref="HGNC:HGNC:5261"
/db_xref="MIM:118190"
/translation="MLRLPTVFRQMRPVSRVLAPHLTRAYAKDVKFGADARALMLQGV
DLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVA
NNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSK
PVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMK
FDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEIANAHRKPLVIIAE
DVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNL
EDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNE
RLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPA
LDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSSEVGYDAMAG
DFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPGMGAMGGMGG
GMGGGMF"
BASE COUNT 723 a 379 c 546 g 599 t
ORIGIN
1 gacgacctgt ctcgccgagc gcacgccttg ctgccgcccc gcagaaatgc ttcggttacc
61 cacagtcttt cggcagatga gaccggtgtc cagggtactg gctcctcatc tcacccgggc
121 ttatgccaaa gatgtaaaat ttggtgcaga tgcccgagcc ttaatgcttc aaggtgtaga
181 ccttttagcc gatgctgtgg ccgttacaat ggggccaaag ggaagaacag tgattattga
241 gcagagttgg ggaagtccca aagtaacaaa agatggtgtg actgttgcaa agtcaattga
301 cttaaaagat aaatacaaga acattggagc taaacttgtt caagatgttg ccaataacac
361 aaatgaagaa gctggggatg gcactaccac tgctactgta ctggcacgct ctatagccaa
421 ggaaggcttc gagaagatta gcaaaggtgc taatccagtg gaaatcagga gaggtgtgat
481 gttagctgtt gatgctgtaa ttgctgaact taaaaagcag tctaaacctg tgaccacccc
541 tgaagaaatt gcacaggttg ctacgatttc tgcaaacgga gacaaagaaa ttggcaatat
601 catctctgat gcaatgaaaa aagttggaag aaagggtgtc atcacagtaa aggatggaaa
661 aacactgaat gatgaattag aaattattga aggcatgaag tttgatcgag gctatatttc
721 tccatacttt attaatacat caaaaggtca gaaatgtgaa ttccaggatg cctatgttct
781 gttgagtgaa aagaaaattt ctagtatcca gtccattgta cctgctcttg aaattgccaa
841 tgctcaccgt aagcctttgg tcataatcgc tgaagatgtt gatggagaag ctctaagtac
901 actcgtcttg aataggctaa aggttggtct tcaggttgtg gcagtcaagg ctccagggtt
961 tggtgacaat agaaagaacc agcttaaaga tatggctatt gctactggtg gtgcagtgtt
1021 tggagaagag ggattgaccc tgaatcttga agacgttcag cctcatgact taggaaaagt
1081 tggagaggtc attgtgacca aagacgatgc catgctctta aaaggaaaag gtgacaaggc
1141 tcaaattgaa aaacgtattc aagaaatcat tgagcagtta gatgtcacaa ctagtgaata
1201 tgaaaaggaa aaactgaatg aacggcttgc aaaactttca gatggagtgg ctgtgctgaa
1261 ggttggtggg acaagtgatg ttgaagtgaa tgaaaagaaa gacagagtta cagatgccct
1321 taatgctaca agagctgctg ttgaagaagg cattgttttg ggagggggtt gtgccctcct
1381 tcgatgcatt ccagccttgg actcattgac tccagctaat gaagatcaaa aaattggtat
1441 agaaattatt aaaagaacac tcaaaattcc agcaatgacc attgctaaga atgcaggtgt
1501 tgaaggatct ttgatagttg agaaaattat gcaaagttcc tcagaagttg gttatgatgc
1561 tatggctgga gattttgtga atatggtgga aaaaggaatc attgacccaa caaaggttgt
1621 gagaactgct ttattggatg ctgctggtgt ggcctctctg ttaactacag cagaagttgt
1681 agtcacagaa attcctaaag aagagaagga ccctggaatg ggtgcaatgg gtggaatggg
1741 aggtggtatg ggaggtggca tgttctaact cctagactag tgctttacct ttattaatga
1801 actgtgacag gaagcccaag gcagtgttcc tcaccaataa cttcagagaa gtcagttgga
1861 gaaaatgaag aaaaaggctg gctgaaaatc actataacca tcagttactg gtttcagttg
1921 acaaaatata taatggttta ctgctgtcat tgtccatgcc tacagataat ttattttgta
1981 tttttgaata aaaaacattt gtacattcct gatactgggt acaagagcca tgtaccagtg
2041 tactgctttc aacttaaatc actgaggcat ttttactact attctgttaa aatcaggatt
2101 ttagtgcttg ccaccaccag atgagaagtt aagcagcctt tctgtggaga gtgagaataa
2161 ttgtgtacaa agtagagaag tatccaatta tgtgacaacc tttgtgtaat aaaaatttgt
2221 ttaaagttaa aaaaaaaaaa aaaaaaa
//