LOCUS BC002902 1277 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synuclein, beta, mRNA (cDNA clone MGC:10445
IMAGE:3944215), complete cds.
ACCESSION BC002902
VERSION BC002902.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1277)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1277)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002902.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48255902.
FEATURES Location/Qualifiers
source 1..1277
/db_xref="H-InvDB:HIT000031277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10445 IMAGE:3944215"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1277
/gene="SNCB"
/db_xref="GeneID:6620"
/db_xref="HGNC:HGNC:11140"
/db_xref="MIM:602569"
CDS 252..656
/gene="SNCB"
/codon_start=1
/product="synuclein, beta"
/protein_id="AAH02902.1"
/db_xref="GeneID:6620"
/db_xref="HGNC:HGNC:11140"
/db_xref="MIM:602569"
/translation="MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKT
REGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKREEFPTDLKPEEVAQEA
AEEPLIEPLMEPEGESYEDPPQEEYQEYEPEA"
BASE COUNT 257 a 422 c 385 g 213 t
ORIGIN
1 ggtccacccc ggcctggcct agcggagccc ccgcgtccgc ccgccgcagc cgccgctcca
61 tccccagccc cggccccgca tccaggcggg tcctggatat tcgcgccgaa cccagcactc
121 cggttcgacg gggctgcagt ttgcagggcc cggataaccg aggcagtggc ccctcccgcg
181 tccccaggtt tcaaggacgc taggactctc cgcggccctg aggcttcgca ctggggagtg
241 gggccgccag gatggacgtg ttcatgaagg gcctgtccat ggccaaggag ggcgtcgtgg
301 cagccgcgga gaaaaccaag cagggggtca ccgaggcggc ggagaagacc aaggagggcg
361 tcctctacgt cggaagcaag acccgagaag gtgtggtaca aggtgtggct tcagtggctg
421 aaaaaaccaa ggaacaggcc tcacatctgg gaggagctgt gttctctggg gcagggaaca
481 tcgcagcagc cacaggactg gtgaagaggg aggaattccc tactgatctg aagccagagg
541 aagtggccca ggaagctgct gaagaaccac tgattgagcc cctgatggag ccagaagggg
601 agagttatga ggacccaccc caggaggaat atcaggagta tgagccagag gcgtaggggc
661 ccaggagagc ccccaccagc agcacaattc tgtccctgtc cctgccccgc cccccagagc
721 cagggctgtc cttagactcc ttctccccaa tcacgagatc ttccttccgc tctgaggcaa
781 ccccctcgga gcctgtgtta gtgtctgtcc atctgtctgt cctacccgcc cgcgtccaac
841 cccggggcat ggacagggcc agggttgcgg tcgcggctgg gagcctcgcc cctccagtgt
901 tgcctcctcc catccagcgt ctgcgcggat gtagcatgtt ctatgtgttt ttaaacgaag
961 atccgagcga cggctcctcc ccgatccccg acagtggctc tccaagcggc ccccgggcag
1021 ccccagagca ccccgcccga ctcccattaa cctcgagaac cttttttttt ttaaccaaaa
1081 ccaggagcca ggctgtgcca tgtcccccgc cccccatccc agccggcccg gtccgaacgc
1141 gggcgtcgtg tgttgtgatt gtggcatgga gagtccccat cccccccatg tgagcgtgtc
1201 ccgggcgggt gggcccggcc gccccccgag agtccatgaa taaagctaat ctgtctgtaa
1261 aaaaaaaaaa aaaaaaa
//