LOCUS BC002876 1737 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans), mRNA (cDNA clone MGC:10286 IMAGE:3940669), complete cds.
ACCESSION BC002876
VERSION BC002876.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1737)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1737)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002876.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922678.
FEATURES Location/Qualifiers
source 1..1737
/db_xref="H-InvDB:HIT000031258"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10286 IMAGE:3940669"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1737
/gene="SMU1"
/gene_synonym="BWD"
/gene_synonym="FLJ10805"
/gene_synonym="RP11-54K16.3"
/gene_synonym="SMU-1"
/db_xref="GeneID:55234"
/db_xref="HGNC:HGNC:18247"
CDS 55..1596
/gene="SMU1"
/gene_synonym="BWD"
/gene_synonym="FLJ10805"
/gene_synonym="RP11-54K16.3"
/gene_synonym="SMU-1"
/codon_start=1
/product="smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)"
/protein_id="AAH02876.1"
/db_xref="GeneID:55234"
/db_xref="HGNC:HGNC:18247"
/translation="MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSI
ESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDP
MIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSR
LMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVE
CARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT
EMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH
GLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGS
TAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCAL
SPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLL
KLWKP"
BASE COUNT 495 a 341 c 426 g 475 t
ORIGIN
1 cctcgtgccg ggccttgagg gagagctggg gcctgctccc ggagagatac ggctatgtcg
61 atcgaaatcg aatcttcgga tgtgatccgc cttattatgc agtacttgaa ggagaacagt
121 ttacatcggg cgttagccac cttgcaggag gagactactg tgtctctgaa tactgtggac
181 agcattgaga gttttgtggc tgacattaac agtggccatt gggatactgt gttgcaggct
241 atacagtctc tgaaattgcc agacaaaacc ctcattgacc tctatgaaca ggttgttctg
301 gaattgatag agctccgtga attgggtgct gccaggtcac ttttgagaca gactgatccc
361 atgatcatgt taaaacaaac acagccagag cgatatattc atctggagaa ccttttggcc
421 aggtcttact ttgatcctcg tgaggcatac ccagatggaa gtagcaaaga aaagagaaga
481 gcagcaattg cccaggcctt agctggcgaa gtcagtgtgg tgcctccatc tcgtctcatg
541 gcattgctgg gacaggcact gaagtggcag cagcatcagg gattgcttcc tcctggtatg
601 accatagatt tgtttcgagg caaggcagct gtcaaagatg tggaagaaga aaagtttcct
661 acacaactga gcaggcatat taagtttggt cagaaatcac atgtggagtg tgctcgattt
721 tctccagatg gtcagtattt ggtcactggg tctgttgatg gattcattga agtatggaac
781 tttactactg gaaaaatcag aaaggatctt aagtaccagg cccaagataa ctttatgatg
841 atggatgatg ctgtcctctg catgtgtttc agcagagata cagaaatgtt agcaactggg
901 gcccaagatg gaaaaatcaa ggtgtggaag attcagagtg gacaatgttt aaggagattt
961 gagagggcac acagtaaggg tgtcacctgt ctaagctttt ctaaggatag cagtcagatc
1021 cttagtgctt cttttgacca gacaattaga attcatggtt taaaatctgg gaaaaccctg
1081 aaggaatttc gtggccattc ctcctttgtt aacgaagcaa catttacaca agatggacat
1141 tacattatta gtgcatcctc tgatggcact gtaaagatct ggaatatgaa gaccacagaa
1201 tgttcaaata cctttaaatc cctgggcagc accgcaggga cagatattac cgtcaacagt
1261 gtgattctac ttcctaaaaa ccctgagcac tttgtggtgt gcaacagatc aaacacggtg
1321 gtcatcatga acatgcaggg gcagattgtc agaagcttca gttctggtaa aagagaaggt
1381 ggggactttg tttgctgtgc cctctctccc cgtggtgaat ggatctactg tgtaggggag
1441 gactttgtgc tctactgttt cagtacagtc actggcaaac tggagagaac tttgacagtg
1501 cacgagaagg atgtgattgg tattgcacat caccctcatc agaacctgat tgctacctac
1561 agtgaagatg gactcctaaa gctctggaaa ccataattca acttttcttt ttaaatcagc
1621 tcgaaagcat gtacttaaat gaagcatatt catgtaatgt gctttttttt tttttttgcc
1681 agcttttcta agcaaataga ttgtctgaat tagtcacaga aaaaaaaaaa aaaaaaa
//