LOCUS BC002867 1644 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens transmembrane protein 55B, mRNA (cDNA clone MGC:11248
IMAGE:3940519), complete cds.
ACCESSION BC002867
VERSION BC002867.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1644)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1644)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389334.
FEATURES Location/Qualifiers
source 1..1644
/db_xref="H-InvDB:HIT000086172"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11248 IMAGE:3940519"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1644
/gene="TMEM55B"
/gene_synonym="DKFZp434M0519"
/gene_synonym="MGC26684"
/db_xref="GeneID:90809"
/db_xref="HGNC:HGNC:19299"
/db_xref="MIM:609865"
CDS 70..903
/gene="TMEM55B"
/gene_synonym="DKFZp434M0519"
/gene_synonym="MGC26684"
/codon_start=1
/product="transmembrane protein 55B"
/protein_id="AAH02867.2"
/db_xref="GeneID:90809"
/db_xref="HGNC:HGNC:19299"
/db_xref="MIM:609865"
/translation="MAADGERSPLLSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPP
YGAAFPPFPEGHPAVLPGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVV
KCGVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGP
LSPEPQPMGVRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRKRCICCFLL
GLLLAVTATGLAFGTWKHARRYGGIYAAWAFVILLAVLCLGRALYWACMKVSHPVQNF
S"
BASE COUNT 350 a 449 c 460 g 385 t
ORIGIN
1 cacgaggggc gacggcagag gcgaagggag ccggatcgcc gacctgagcg ggaggcggcg
61 gtggcggcca tggcggcaga tggagagcgt tccccgctgc tgtctgagcc catcgacggt
121 ggcgcgggcg gcaacggttt agtggggccc ggcgggagtg gggctgggcc cgggggaggc
181 ctgaccccct ccgcaccacc gtacggagcc gcatttcccc cgtttcccga ggggcatcca
241 gccgtgttgc ctggggagga cccacccccc tattcaccct taactagccc ggacagtggg
301 agtgccccta tgatcacctg ccgagtctgc caatctctca tcaacgtgga aggcaagatg
361 catcagcatg tagtcaaatg tggtgtctgc aatgaagcca ccccaatcaa gaatgcaccc
421 ccagggaaaa aatatgttcg atgcccctgt aactgtctcc ttatctgcaa agtgacatcc
481 caacggattg catgccctcg gccctactgc aaaagaatca tcaacctggg gcctgtgcat
541 cccggacctc tgagtccaga accccaaccc atgggtgtca gggttatctg tggacattgc
601 aagaatactt ttctgtggac agagttcaca gaccgcactt tggcacgttg tcctcactgc
661 aggaaagtgt catctattgg gcgcagatac ccacgtaaga gatgtatctg ctgcttcttg
721 cttggcttgc ttttggcagt cactgccact ggccttgcct ttggcacatg gaagcatgca
781 cggcgatatg gaggcatcta tgcagcctgg gcatttgtca tcctgttggc tgtgctgtgt
841 ttgggccggg ctctttattg ggcctgtatg aaggtcagcc accctgtcca gaacttctcc
901 tgagcctgat gacccacaga ctgtgcctgg cccctccctg gtggggacag tgacactacg
961 aagggagctg gggtagttaa aggctcccgg ggcttctaga aggaagccaa gcagctgcct
1021 tccttttccc tggggagagg taggaaggaa ccaggccctc acttaggttt ggaggggcag
1081 ataagagcac tgctgaccat ctgctttcct ccaagggttg ctgtgtctag ggtgaagtag
1141 gcaaaacgtt gcccttaaaa ctgggccctg aagacggttc cagccttgtc cttcctgtgt
1201 gctccctgag agccattcct gtcccttaca cattccaggg cagggtgggg gtgggtagcc
1261 ctgggggttc ccctccctct tgtgcaccat taggactttg ctgctgctat tgcacttcac
1321 cagaggttgg ctctggcctc agtaccctca gtctcctctc cccacattgt gtcctgtggg
1381 ggtggggtca gccgctgctc tgtacagaac cacaggaact gatgtgtata taactattta
1441 atgtgggata tgttccccta ttcctgtatt tcccttaatt cctcctcccg acctttttta
1501 cccccccagt tgcagtattt aactgggctg ggtagggttg ctcagtcttt gggggaggtt
1561 agggacttat cctgtgcttg taaataaata aggtcatgac tctaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaa
//