LOCUS BC002668 1383 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxisomal D3,D2-enoyl-CoA isomerase, mRNA (cDNA
clone MGC:3558 IMAGE:3608151), complete cds.
ACCESSION BC002668
VERSION BC002668.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1383)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1383)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002668.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45643118.
FEATURES Location/Qualifiers
source 1..1383
/db_xref="H-InvDB:HIT000031080"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3558 IMAGE:3608151"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1383
/gene="PECI"
/gene_synonym="ACBD2"
/gene_synonym="dJ1013A10.3"
/gene_synonym="DRS1"
/gene_synonym="HCA88"
/db_xref="GeneID:10455"
/db_xref="HGNC:HGNC:14601"
/db_xref="MIM:608024"
CDS 105..1199
/gene="PECI"
/gene_synonym="ACBD2"
/gene_synonym="dJ1013A10.3"
/gene_synonym="DRS1"
/gene_synonym="HCA88"
/codon_start=1
/product="peroxisomal D3,D2-enoyl-CoA isomerase"
/protein_id="AAH02668.3"
/db_xref="GeneID:10455"
/db_xref="HGNC:HGNC:14601"
/db_xref="MIM:608024"
/translation="MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATE
GPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGT
DRKSTGFETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLT
GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVG
ISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKL
TAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVN
AEECNVLQGRWLSDECTNAVVNFLSRKSKL"
BASE COUNT 433 a 280 c 329 g 341 t
ORIGIN
1 gagccgccca agggatggcg atggcgtact tggcttggag actggcgcgg cgttcgtgtc
61 cgagttctct gcaggtcact agtttcccgg tagttcagct gcacatgaat agaacagcaa
121 tgagagccag tcagaaggac tttgaaaatt caatgaatca agtgaaactc ttgaaaaagg
181 atccaggaaa cgaagtgaag ctaaaactct acgcgctata taagcaggcc actgaaggac
241 cttgtaacat gcccaaacca ggtgtatttg acttgatcaa caaggccaaa tgggacgcat
301 ggaatgccct tggcagcctg cccaaggaag ctgccaggca gaactatgtg gatttggtgt
361 ccagtttgag tccttcattg gaatcctcta gtcaggtgga gcctggaaca gacaggaaat
421 caactgggtt tgaaactctg gtggtgacct ccgaagatgg catcacaaag atcatgttca
481 accggcccaa aaagaaaaat gccataaaca ctgagatgta tcatgaaatt atgcgtgcac
541 ttaaagctgc cagcaaggat gactcaatca tcactgtttt aacaggaaat ggtgactatt
601 acagtagtgg gaatgatctg actaacttca ctgatattcc ccctggtgga gtagaggaga
661 aagctaaaaa taatgccgtt ttactgaggg aatttgtggg ctgttttata gattttccta
721 agcctctgat tgcagtggtc aatggtccag ctgtgggcat ctccgtcacc ctccttgggc
781 tattcgatgc cgtgtatgca tctgacaggg caacatttca tacaccattt agtcacctag
841 gccaaagtcc ggaaggatgc tcctcttaca cttttccgaa gataatgagc ccagccaagg
901 caacagagat gcttattttt ggaaagaagt taacagcggg agaggcatgt gctcaaggac
961 ttgttactga agttttccct gatagcactt ttcagaaaga agtctggacc aggctgaagg
1021 catttgcaaa gcttccccca aatgccttga gaatttcaaa agaggtaatc aggaaaagag
1081 agagagaaaa actacacgct gttaatgctg aagaatgcaa tgtccttcag ggaagatggc
1141 tatcagatga atgcacaaat gctgtggtga acttcttatc cagaaaatca aaactgtgat
1201 gaccactaca gcagagtaaa gcatgtccaa ggaaggatgt gctgttacct ctgatttcca
1261 gtactggaac taaataagct tcattgtgcc ttttgtagtg ctagaatatc aattacaatg
1321 atgatatttc actacagctc tgatgaataa aaagttttgt aaaacaaaaa aaaaaaaaaa
1381 aaa
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