LOCUS BC002502 913 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 2A, mRNA (cDNA clone
MGC:806 IMAGE:3051024), complete cds.
ACCESSION BC002502
VERSION BC002502.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 913)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 913)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002502.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38372932.
FEATURES Location/Qualifiers
source 1..913
/db_xref="H-InvDB:HIT000030945"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:806 IMAGE:3051024"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..913
/gene="CHMP2A"
/gene_synonym="BC-2"
/gene_synonym="BC2"
/gene_synonym="CHMP2"
/gene_synonym="VPS2"
/db_xref="GeneID:27243"
/db_xref="HGNC:HGNC:30216"
CDS 134..802
/gene="CHMP2A"
/gene_synonym="BC-2"
/gene_synonym="BC2"
/gene_synonym="CHMP2"
/gene_synonym="VPS2"
/codon_start=1
/product="chromatin modifying protein 2A"
/protein_id="AAH02502.1"
/db_xref="GeneID:27243"
/db_xref="HGNC:HGNC:30216"
/translation="MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII
ADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQA
MKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEES
DAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAAASALADADADLEERLKN
LRRD"
BASE COUNT 250 a 225 c 273 g 165 t
ORIGIN
1 ctggaccgtg gatcccgggc gggcgtgcgg gcggcagcgt acgaggcctt ctactcgccc
61 gggtgtccgg tgcctcgctt ctccctggga ccctgtcgtc aacatcgagg cctgccagtg
121 agcttctacc atcatggacc tattgttcgg gcgccggaag acgccagagg agctactgcg
181 gcagaaccag agggccctga accgtgccat gcgggagctg gaccgcgagc gacagaaact
241 agagacccag gagaagaaaa tcattgcaga cattaagaag atggccaagc aaggccagat
301 ggatgctgtt cgcatcatgg caaaagactt ggtgcgcacc cggcgctatg tgcgcaagtt
361 tgtattgatg cgggccaaca tccaggctgt gtccctcaag atccagacac tcaagtccaa
421 caactcgatg gcacaagcca tgaagggtgt caccaaggcc atgggcacca tgaacagaca
481 gctgaagttg ccccagatcc agaagatcat gatggagttt gagcggcagg cagagatcat
541 ggatatgaag gaggagatga tgaatgatgc cattgatgat gccatgggtg atgaggaaga
601 tgaagaggag agtgatgctg tggtgtccca ggttctggat gagctgggac ttagcctaac
661 agatgagctg tcgaacctcc cctcaactgg gggctcgctt agtgtggctg ctggtgggaa
721 aaaagcagag gccgcagcct cagccctagc tgatgctgat gcagacctgg aggaacggct
781 taagaacctg cggagggact gagtgcccct gccactccga gataaccagt ggatgcccag
841 gatcttttac cacaacccct ctgtaataaa agagatttga cactaaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaa
//