LOCUS BC002438 1369 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB4A, member RAS oncogene family, mRNA (cDNA clone
MGC:1486 IMAGE:3346455), complete cds.
ACCESSION BC002438
VERSION BC002438.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1369)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1369)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923259.
FEATURES Location/Qualifiers
source 1..1369
/db_xref="H-InvDB:HIT000030892"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1486 IMAGE:3346455"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1369
/gene="RAB4A"
/db_xref="GeneID:5867"
/db_xref="HGNC:HGNC:9781"
/db_xref="MIM:179511"
CDS 72..728
/gene="RAB4A"
/codon_start=1
/product="RAB4A, member RAS oncogene family"
/protein_id="AAH02438.1"
/db_xref="GeneID:5867"
/db_xref="HGNC:HGNC:9781"
/db_xref="MIM:179511"
/translation="MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNH
TIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYN
ALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTG
ENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC
"
BASE COUNT 422 a 251 c 314 g 382 t
ORIGIN
1 caccgagacg cgccggcgga ccgcgggcga gtgcagccgg tgacccggcg agaggcggcg
61 ccgctcccaa gatgtcgcag acggccatgt ccgaaaccta cgattttttg tttaagttct
121 tggttattgg aaatgcagga actggcaaat cttgcttact tcatcagttt attgaaaaaa
181 aattcaaaga tgactcaaat catacaatag gagtggaatt tggttcaaag ataataaatg
241 ttggtggtaa atatgtaaag ttacaaatat gggatacagc aggacaagaa cgattcaggt
301 ccgtgacgag aagttattac cgaggcgcgg ccggggctct cctcgtctat gatatcacca
361 gccgagaaac ctacaatgcg cttactaatt ggttaacaga tgcccgaatg ctagcgagcc
421 agaacattgt gatcatcctt tgtggaaaca agaaggacct ggatgcagat cgtgaagtta
481 ccttcttaga agcctccaga tttgctcaag aaaatgagct gatgtttttg gaaacaagtg
541 cgctcacagg ggagaatgta gaagaggctt ttgtacagtg tgcaagaaaa atacttaaca
601 aaatcgaatc aggtgagctg gacccagaaa gaatgggctc aggtattcag tacggagatg
661 ctgccttgag acagctgagg tcaccgcggc gcgcacaggc cccgaacgct caggagtgtg
721 gttgttagga gagcacacag gtgttcatac agtggcattt gggacacaat cgttggaacc
781 tgaagaatct gaagtttttt ttaccaccat ctttttctac tctgtatgga agtagatctt
841 tatggggaaa agagaatttg gggtgttctg caagccagtc aaagtggcac agcaaatcat
901 ataaatcgaa ttaaatggac aacaccgtta gatgtgtatg taaaaatttt ctgtttcata
961 tttttccttt cactttcggt ttaaaacatg ctatatgtac tgtatgtcct gtagcccagt
1021 gcggctccac agcatggaat ctgatgtatg atatgataga atgtggcact aaatgcagtt
1081 tcagatttta ttttttttaa tcatatgaac taaaattgtc aattgtgagg tgtgcttttc
1141 tcatcatgtt ggttatattg cacaattggt tatatttatg acctgatatt caaagactct
1201 ggcattgata gccagtgtgt tttcttattt aactccgttt actacattct acatggtgtt
1261 tacgtgatcc acacttgaaa tactagatca gtagacattc actaatatac caaaataaaa
1321 tgaaaaattg agtttttccg tgaaaaaaaa aaaaaaaaaa aaaaaaaaa
//