LOCUS       BC002394                1689 bp    mRNA    linear   HUM 04-AUG-2008
DEFINITION  Homo sapiens ceroid-lipofuscinosis, neuronal 3, mRNA (cDNA clone
            MGC:8415 IMAGE:2820893), complete cds.
ACCESSION   BC002394
VERSION     BC002394.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1689)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC002394.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 1 Row: d Column: 22
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 4502888.
FEATURES             Location/Qualifiers
     source          1..1689
                     /db_xref="H-InvDB:HIT000030857"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:8415 IMAGE:2820893"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1689
                     /gene="CLN3"
                     /gene_synonym="BATTENIN"
                     /gene_synonym="JNCL"
                     /db_xref="GeneID:1201"
                     /db_xref="HGNC:HGNC:2074"
                     /db_xref="MIM:607042"
     CDS             118..1434
                     /gene="CLN3"
                     /gene_synonym="BATTENIN"
                     /gene_synonym="JNCL"
                     /codon_start=1
                     /product="ceroid-lipofuscinosis, neuronal 3"
                     /protein_id="AAH02394.1"
                     /db_xref="GeneID:1201"
                     /db_xref="HGNC:HGNC:2074"
                     /db_xref="MIM:607042"
                     /translation="MGGCAGSRRRFSDSEGEETVPEPRLPLLDHQGAHWKNAVGFWLL
                     GLCNNFSYVVMLSAAHDILSHKRTSGNQSHVDPGPTPIPHNSSSRFDCNSVSTAAVLL
                     ADILPTLVIKLLAPLGLHLLPYSPRVLVSGICAAGSFVLVAFSHSVGTSLCGVVFASI
                     SSGLGEVTFLSLTAFYPRAVISWWSSGTGGAGLLGALSYLGLTQAGLSPQQTLLSMLG
                     IPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLIRTEAPESKPGSSSSLSLRERWT
                     VFKGLLWYIVPLVVVYFAEYFINQGLFELLFFWNTSLSHAQQYRWYQMLYQAGVFASR
                     SSLRCCRIRFTWALALLQCLNLVFLLADVWFGFLPSIYLVFLIILYEGLLGGAAYVNT
                     FHNIALETSDEHREFAMAATCISDTLGISLSGLLALPLHDFLCQLS"
BASE COUNT          291 a          538 c          455 g          405 t
ORIGIN      
        1 acggcctctg catagtgcag aacattctgc tgctcttaaa gaccctcatc cctcccgtgg
       61 gagccccctt tggacactct atgaccctgg accctcgggg gacctgaact tgatgcgatg
      121 ggaggctgtg caggctcgcg gcggcgcttt tcggattccg agggggagga gaccgtcccg
      181 gagccccggc tccctctgtt ggaccatcag ggcgcgcatt ggaagaacgc ggtgggcttc
      241 tggctgctgg gcctttgcaa caacttctct tatgtggtga tgctgagtgc cgcccacgac
      301 atccttagcc acaagaggac atcgggaaac cagagccatg tggacccagg cccaacgccg
      361 atcccccaca acagctcatc acgatttgac tgcaactctg tctctacggc tgctgtgctc
      421 ctggcggaca tcctccccac actcgtcatc aaattgttgg ctcctcttgg ccttcacctg
      481 ctgccctaca gcccccgggt tctcgtcagt gggatttgtg ctgctggaag cttcgtcctg
      541 gttgcctttt ctcattctgt ggggaccagc ctgtgtggtg tggtcttcgc tagcatctca
      601 tcaggccttg gggaggtcac cttcctctcc ctcactgcct tctaccccag ggccgtgatc
      661 tcctggtggt cctcagggac tgggggagct gggctgctgg gggccctgtc ctacctgggc
      721 ctcacccagg ccggcctctc ccctcagcag accctgctgt ccatgctggg tatccctgcc
      781 ctgctgctgg ccagctattt cttgttgctc acatctcctg aggcccagga ccctggaggg
      841 gaagaagaag cagagagcgc agcccggcag cccctcataa gaaccgaggc cccggagtcg
      901 aagccaggct ccagctccag cctctccctt cgggaaaggt ggacagtgtt caagggtctg
      961 ctgtggtaca ttgttccctt ggtcgtagtt tactttgccg agtatttcat taaccaggga
     1021 ctttttgaac tcctcttttt ctggaacact tccctgagtc acgctcagca ataccgctgg
     1081 taccagatgc tgtaccaggc tggcgtcttt gcctcccgct cttctctccg ctgctgtcgc
     1141 atccgtttca cctgggccct ggccctgctg cagtgcctca acctggtgtt cctgctggca
     1201 gacgtgtggt tcggctttct gccaagcatc tacctcgtct tcctgatcat tctgtatgag
     1261 gggctcctgg gaggcgcagc ctacgtgaac accttccaca acatcgccct ggagaccagt
     1321 gatgagcacc gggagtttgc aatggcggcc acctgcatct ctgacacact ggggatctcc
     1381 ctgtcggggc tcctggcttt gcctctgcat gacttcctct gccagctctc ctgatactcg
     1441 ggatcctcag gacgcaggtc acattcacct gtgggcagag ggacaggtca gacacccagg
     1501 cccaccccag agaccctcca tgaactgtgc tcccagcctt cccggcaggt ctgggagtag
     1561 ggaagggctt aagccttgtt tcccttgcag gggggccagc cattgtctcc cacttgggga
     1621 gtttcttcct ggcatcatgc cttctgaata aatgccgatt ttatccatgg aaaaaaaaaa
     1681 aaaaaaaaa
//